| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4622 |
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| Symbol | |
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| ID | 8328820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 5505178 |
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| End bp | 5505954 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 644945069 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_003102301 |
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| Protein GI | 256378641 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGGAA CGGGCAGGGG TGACCTGGTG GGGCGGCTGG CCGTCGTGGC CGGTGGCAGC
AGGGGAACGG GGGCGGCCGT GGCGCGGCGG CTGGCCGACG AGGGGGCGCG CGTGGTGACC
ATCGCCCGCG CGCCCGCCGA CGACGGGCCG CTCGCGGTGC GGGCCGACCT GGGCACGCCG
GAGGGCGTCG CGGCGGCGGC CGGGGCGGTG GCCGCGATCG GCGTGCCGGA CGTCCTGGTG
CACGTCGTGG GCGGGTCGCG GACGCCGTCG GGCGGGTACG CGGTGATCGA CGACGGGTTG
TGGGGCGAGG AGCTGGCGCT GAACCTGCTG GCGGCGGTGC GCCTGGACCG GGCGCTGCTG
CCCGGCATGG TGGCGCGCGG GTCGGGGTCG GTCGTGCACG TCACGTCGAT CCAGCGCCGG
TTGCCGCTGC ACGGGTCGAC GCTGGCCTAC GCCTCGGCCA AGGCCGCGCT CGCCACCTAC
AGCAAGGGCC TGGCGAACGA GGTCGCGCCG AGCGGGGTCC GGGTGAACTC GGTCGCGCCG
GGGTGGATCC GCACGGACGG GTCCGAGGCG CTGCTGGCCC GCCGGGAGCG CGAGGGCGGG
CTCACCCGCG AGGCCGCGAT CGCCGAGCTG GCGCGGGCGC TGGGCGGCGT GCCGCTCGGC
AGGCCCGCCG AACCGGAGGA GGTGGCGGAG GTGATCGGAT TCCTCGCCTC GGACCGCGCG
GGATCGGTGG TCGGCGCGGA GTTCGTGGTC GACGGTGGCA CCATTCCGAC GGTGTGA
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| Protein sequence | MSGTGRGDLV GRLAVVAGGS RGTGAAVARR LADEGARVVT IARAPADDGP LAVRADLGTP
EGVAAAAGAV AAIGVPDVLV HVVGGSRTPS GGYAVIDDGL WGEELALNLL AAVRLDRALL
PGMVARGSGS VVHVTSIQRR LPLHGSTLAY ASAKAALATY SKGLANEVAP SGVRVNSVAP
GWIRTDGSEA LLARREREGG LTREAAIAEL ARALGGVPLG RPAEPEEVAE VIGFLASDRA
GSVVGAEFVV DGGTIPTV
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