Gene Amir_4512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4512 
Symbol 
ID8328709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp5354019 
End bp5354672 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content77% 
IMG OID644944969 
ProductVanZ family protein 
Protein accessionYP_003102202 
Protein GI256378542 
COG category[V] Defense mechanisms 
COG ID[COG4767] Glycopeptide antibiotics resistance protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.107268 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGGAA CGCCGCGCAC GCGCGGGATC GTGCTCACCA CCGTGGCCGT GCTGGTCCTC 
GCCTCGGTCC TGTTCGCCCT GCGCCGGCCG CTGATGATGG CCGCGCCCGC GTGCGCGGCG 
GGCCGGTGGC ACGGGTGCCT GGGCACCGAG AACGGCGTGG TGCTCGTGAC GCTGGTCGGC 
GTGCCGGTCG CCGTCCTGGC CGCGTGGGCG CTGGCCCGCC TCCGGGGCGC GGGGGCGTGG 
CGCGCCTCGG TGGCCGAGGT CGGGATGGTC TACGGGACGC TCCCGTGGTT GTGGATCACG 
CTGATGCCGG GTGAGCGCGC GGGCGAGGTC CCCGGCAGGC TGAGCCTGCT GCCGCTGCGC 
GACCTGCTGG GGATGGGGCC GCTGGGGATC GTGGGGAACC TGCTGGTGTT CGCGGCGCTC 
GGCTTCTTCG CGCCGGTGCG GTTCCCGGCG CTGGCGTCCG CACCGCGCGC GCTGGCGCTG 
GGCGCGGTCT GCTCGCTGCT GGTCGAGACC GCGCAGTACG TCCTCCAGCT GGACCGGGTG 
TCGTCGGTGG ACGACGTGCT GCTCAACGCG ACCGGCGCGG CGCTGGCCGC CCTGGCGTCC 
CGCCGCTGGT GGGCGCGCGC CCCGAGGCCG CGGCCAGCGG CAGCGCGACC GTGA
 
Protein sequence
MPGTPRTRGI VLTTVAVLVL ASVLFALRRP LMMAAPACAA GRWHGCLGTE NGVVLVTLVG 
VPVAVLAAWA LARLRGAGAW RASVAEVGMV YGTLPWLWIT LMPGERAGEV PGRLSLLPLR 
DLLGMGPLGI VGNLLVFAAL GFFAPVRFPA LASAPRALAL GAVCSLLVET AQYVLQLDRV 
SSVDDVLLNA TGAALAALAS RRWWARAPRP RPAAARP