| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4493 |
|---|
| Symbol | |
|---|
| ID | 8328690 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 5324692 |
|---|
| End bp | 5325459 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 644944950 |
|---|
| Product | Thioesterase |
|---|
| Protein accession | YP_003102183 |
|---|
| Protein GI | 256378523 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3208] Predicted thioesterase involved in non-ribosomal peptide biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.379386 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCCAC CCCGGCGCGG TAAGTGGCTG CTGCGCGCGC CGGACCCGGA CGCGCGGGCC
CGCCTGTTCT GCTTCCCCTA CTCGGGGCTG GGCGCCTCGA TGTACGGCCG GTGGCCGCGC
GCGGTCGGCG ACCTGGAGGT GTGCGCCGTG CAGCCGCCCG GCAGGGAGAA CCGCATCCGC
GAACCCCACC ACGGCGGCTA CCCGGAGCTG GCCGACCTCG CCGCCACCGC GCTGCTGCCG
CACCTGGACC GGCCGTTCGC GTTCTTCGGG CACTGCGGGG GAGCGCTGGC CGCGTTCGCC
ACCGCCGCGC GGCTGGCCGA GACCGGCGGG CCCGTCCCGA CCGTGCTGTT CGCCTCGTCC
CAGGTCGCCC CGCACGAGGG GCCGTTCGGG AGGTTCCTGT CCATGTCGGA CGCCGAGCTG
TCGGTGGAGC TGGGGGAGCT GACCCGCGCG CTGGGCGGCG TCCCCGACCC GGACATGATC
GAGCTGGGGC TGGGCGTGCT GCGCGCCGAC CTGGCCGCGA ACCGGGGCTA CCGGCTCGAC
GCGCCCCTCG CGCCGGGGTC CGACGTCTGC GCGGTCGGCT GGTCCGCCGA CGCGGAGATC
CGCCCCGACC AGATGGGCGG GTGGCGCGAC TGCGCGCCCG AGGGCGGGTT CACCGCGCCC
GTCCTCGACG GCGGGCACCA CGCCTTCCTC GCGGCCCCCG AGCACCTGCT CGCCGAGCTG
GAGCTGACCT TCACCCGCAG CCTCGCCCGC CACAGGGGGA CCCGTTGA
|
|---|
| Protein sequence | MPPPRRGKWL LRAPDPDARA RLFCFPYSGL GASMYGRWPR AVGDLEVCAV QPPGRENRIR
EPHHGGYPEL ADLAATALLP HLDRPFAFFG HCGGALAAFA TAARLAETGG PVPTVLFASS
QVAPHEGPFG RFLSMSDAEL SVELGELTRA LGGVPDPDMI ELGLGVLRAD LAANRGYRLD
APLAPGSDVC AVGWSADAEI RPDQMGGWRD CAPEGGFTAP VLDGGHHAFL AAPEHLLAEL
ELTFTRSLAR HRGTR
|
|---|
| |