Gene Amir_4416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4416 
Symbol 
ID8328613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp5211436 
End bp5212527 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content76% 
IMG OID644944876 
Productcobalamin synthesis CobW domain protein 
Protein accessionYP_003102109 
Protein GI256378449 
COG category[R] General function prediction only 
COG ID[COG0523] Putative GTPases (G3E family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00259515 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCGGGC TCGCCGACCA CGACGTCGCC CAGGAGATCT GGCTCGCCTC GCCCGGAGCG 
GTGCTGGTGC GGCACGACCT GCGCGAGCTC GCCCAGGGGA TCGTGCGGCG GTGGGTCGAC
GGCGAGCTGA CCGTGCTCGA ACTCGCCCAC GGCTGCGTCT CCTGCACCCT GCGCCTGGAC
CTGCTCCCGC TGCTGGAGAG CCTCGGCGGC CGGGTCGTCG TGCACCTGGA CCCCGCGCTC
GAACCCGAGG CGGTCTGCTT CGCGCTGCGC GAGGTCGACG TGCGCGTCGA CGCCGTCGTG
TCCGTGGTCG ACCGGGCCAC CTGGCTGGCC GACGCCACCG GCGAGGACGA CATGGCCGAC
CGGGGCCTCG CCGCCGCCGA CGGGGACGAC CGGACCGTCG CCCAGGTCGT CGTGGGGCAG
GCCGAGTTCG CCGACGCGCT CGTGCTCGTC GGCGACGACC CCGACCCCGT GCTGGACGCG
GTCCTGGACC GCCTCAACCC GCGCGCCCCG CGTCGTGACC GCCGCGGCCT GGACGCCGCC
GCGCTGCTGG CCGCGGTGCC CGCCGACGCC CGGCGCGGCC GGTTCGACGA CGGCTTCGGC
GCCCTCCTGC GCGGCCAGCC GCCCCTGGAG CCCGCGCACG GCGTCGCCGT CGTCCACTTC
ACCGCCCGCC GCCCGTTCCA CCCCGTGCGG CTGCACGACG CGCTGGACGT GCTGCTCGAC
GGCGTCGTCC GCACGCGCGG CCGGGTGTGG CTGGTCAGCC AGCCGGAGAC CGCGCTGTGG
CTGGAATCGG CGGGCGGCGG GCTCAACGTC GGCAACCTCG GGCACTGGCT CGCCGCCGTC
GACGACTGGT CCGACGAGCC CGCCGAGCGC AGGCTCGCCG CCGCCGCGCA CTGGGACCCG
GAGTTCGGCG ACCGCGCCCA GGAGCTGGTC GTGATCACCG GGAGCGCCTC GCCCGACGAG
ATCGCCGCCG TGCTGCGGGA CGCGCTCGTC ACCGACGAGG AGCTGGCGCT CGCCGACGAG
CTGGAGTTCG CCGACCCGTT CGCGGAGTGG CGCGACGAGA GCAACCGCAA CGATGAGATG
GAGGAGCTGT GA
 
Protein sequence
MAGLADHDVA QEIWLASPGA VLVRHDLREL AQGIVRRWVD GELTVLELAH GCVSCTLRLD 
LLPLLESLGG RVVVHLDPAL EPEAVCFALR EVDVRVDAVV SVVDRATWLA DATGEDDMAD
RGLAAADGDD RTVAQVVVGQ AEFADALVLV GDDPDPVLDA VLDRLNPRAP RRDRRGLDAA
ALLAAVPADA RRGRFDDGFG ALLRGQPPLE PAHGVAVVHF TARRPFHPVR LHDALDVLLD
GVVRTRGRVW LVSQPETALW LESAGGGLNV GNLGHWLAAV DDWSDEPAER RLAAAAHWDP
EFGDRAQELV VITGSASPDE IAAVLRDALV TDEELALADE LEFADPFAEW RDESNRNDEM
EEL