Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_4416 |
Symbol | |
ID | 8328613 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 5211436 |
End bp | 5212527 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 644944876 |
Product | cobalamin synthesis CobW domain protein |
Protein accession | YP_003102109 |
Protein GI | 256378449 |
COG category | [R] General function prediction only |
COG ID | [COG0523] Putative GTPases (G3E family) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00259515 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGCCGGGC TCGCCGACCA CGACGTCGCC CAGGAGATCT GGCTCGCCTC GCCCGGAGCG GTGCTGGTGC GGCACGACCT GCGCGAGCTC GCCCAGGGGA TCGTGCGGCG GTGGGTCGAC GGCGAGCTGA CCGTGCTCGA ACTCGCCCAC GGCTGCGTCT CCTGCACCCT GCGCCTGGAC CTGCTCCCGC TGCTGGAGAG CCTCGGCGGC CGGGTCGTCG TGCACCTGGA CCCCGCGCTC GAACCCGAGG CGGTCTGCTT CGCGCTGCGC GAGGTCGACG TGCGCGTCGA CGCCGTCGTG TCCGTGGTCG ACCGGGCCAC CTGGCTGGCC GACGCCACCG GCGAGGACGA CATGGCCGAC CGGGGCCTCG CCGCCGCCGA CGGGGACGAC CGGACCGTCG CCCAGGTCGT CGTGGGGCAG GCCGAGTTCG CCGACGCGCT CGTGCTCGTC GGCGACGACC CCGACCCCGT GCTGGACGCG GTCCTGGACC GCCTCAACCC GCGCGCCCCG CGTCGTGACC GCCGCGGCCT GGACGCCGCC GCGCTGCTGG CCGCGGTGCC CGCCGACGCC CGGCGCGGCC GGTTCGACGA CGGCTTCGGC GCCCTCCTGC GCGGCCAGCC GCCCCTGGAG CCCGCGCACG GCGTCGCCGT CGTCCACTTC ACCGCCCGCC GCCCGTTCCA CCCCGTGCGG CTGCACGACG CGCTGGACGT GCTGCTCGAC GGCGTCGTCC GCACGCGCGG CCGGGTGTGG CTGGTCAGCC AGCCGGAGAC CGCGCTGTGG CTGGAATCGG CGGGCGGCGG GCTCAACGTC GGCAACCTCG GGCACTGGCT CGCCGCCGTC GACGACTGGT CCGACGAGCC CGCCGAGCGC AGGCTCGCCG CCGCCGCGCA CTGGGACCCG GAGTTCGGCG ACCGCGCCCA GGAGCTGGTC GTGATCACCG GGAGCGCCTC GCCCGACGAG ATCGCCGCCG TGCTGCGGGA CGCGCTCGTC ACCGACGAGG AGCTGGCGCT CGCCGACGAG CTGGAGTTCG CCGACCCGTT CGCGGAGTGG CGCGACGAGA GCAACCGCAA CGATGAGATG GAGGAGCTGT GA
|
Protein sequence | MAGLADHDVA QEIWLASPGA VLVRHDLREL AQGIVRRWVD GELTVLELAH GCVSCTLRLD LLPLLESLGG RVVVHLDPAL EPEAVCFALR EVDVRVDAVV SVVDRATWLA DATGEDDMAD RGLAAADGDD RTVAQVVVGQ AEFADALVLV GDDPDPVLDA VLDRLNPRAP RRDRRGLDAA ALLAAVPADA RRGRFDDGFG ALLRGQPPLE PAHGVAVVHF TARRPFHPVR LHDALDVLLD GVVRTRGRVW LVSQPETALW LESAGGGLNV GNLGHWLAAV DDWSDEPAER RLAAAAHWDP EFGDRAQELV VITGSASPDE IAAVLRDALV TDEELALADE LEFADPFAEW RDESNRNDEM EEL
|
| |