| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4398 |
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| Symbol | |
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| ID | 8328595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 5195346 |
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| End bp | 5196095 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644944860 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003102093 |
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| Protein GI | 256378433 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGACAGC TCGAAGGCAA GACCGCCGTC GTCACCGGCG GGGGCACCGG GATCGGGCTC
GCCAGCGCGG TCCGGCTCGC CCGTGAGGGC GCGCACGTGT TCATCACCGG GCGTCGCGAG
GCCGAGCTGG CCGCCGCCGT CGCCGAGATC GGGGAGGGCT CGGCCACCGC CGTGCGCGGC
GACGTCACCG ACCCCGCCGA CCTCGACCGG CTCTACGCCG CCGTCCAGGC GCGCGGCCAC
GGGCTCGACG TGGTCTTCGC CAACGCCGCC AACGCCGCGC ACGTCCCCCT GGAGAAGATC
ACCGAGGCGG ACTACGCCGC GATCTTCGAC GTCAACGTCC TCGGCGTCCT GCGCACCGTG
CAGAAGTCCC TGCCGCTGCT CAACGACGGC GCCTCGGTCA TCCTCAACGC CTCCACCGCC
GCCGACAACG GCGCGCACTC GTTCGGCCTC TACGCCGCCT CCAAGGCCGC CGTCCGCTCG
TTCGCCCGCA CCTGGGCGAC CGAGCTGAAG GACCGGGGCG TGCGGGTCAA CGCGATCTCG
CCCGGCCCGG TCGGCACGCC CGGCCTCGAA CTGCTCGTCG GCTCCGACAA CATCGCAGCC
GCCCACGCGA GCCTCGGCGG CTCGATCCTG GCGGGCCGGA TGGGGCGTCC CGAGGAGGTC
GCGGCGGCCG TGGTGTTCCT GGCCTCGCCG GGGAGCAGCT TCGTCATGGG CTCGAACCTG
TACGTGGACG GCGGCGAGAA CCAGGTCTGA
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| Protein sequence | MGQLEGKTAV VTGGGTGIGL ASAVRLAREG AHVFITGRRE AELAAAVAEI GEGSATAVRG
DVTDPADLDR LYAAVQARGH GLDVVFANAA NAAHVPLEKI TEADYAAIFD VNVLGVLRTV
QKSLPLLNDG ASVILNASTA ADNGAHSFGL YAASKAAVRS FARTWATELK DRGVRVNAIS
PGPVGTPGLE LLVGSDNIAA AHASLGGSIL AGRMGRPEEV AAAVVFLASP GSSFVMGSNL
YVDGGENQV
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