| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4357 |
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| Symbol | |
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| ID | 8328554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 5138804 |
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| End bp | 5141272 |
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| Gene Length | 2469 bp |
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| Protein Length | 822 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 644944821 |
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| Product | Beta-ketoacyl synthase |
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| Protein accession | YP_003102054 |
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| Protein GI | 256378394 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3321] Polyketide synthase modules and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.25274 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGACC AGCTGCGCGA TTACCTCAAG CGGGTCGTGG CCGAGCTCCA CCGCACCAAG
GAAGCCCTGG TGCGGGAGCG CAGGCGCGAA CCGGTCGCCG TCGTCGGCCT GGCCCGCCGG
GGCCCCGGTG GCGCGGACTT CGACGCGGAC TTCTTCGGCC TGTCCCGGCC GCAGGCGCTC
GCGCTCGACC CCCGGCAGCG GTCGGCGCTG GAGAGCGCGT GGGAGGTGTT CGAGCACGCG
GGCGTCAACC CGGTCACCGC GCGCGGCAGC GGGACCGGCG TGTTCGCCGG GAGCGCCGAC
CGCGACCCCG AGCCGGAGAG CGCCGACCTG CCCCGCGGCA CGTCCGGCCG CCTCGCCCAC
CTGCTCGGGT TCGGCGGTCC CGCGCTCACC GTCGACACGG CCTGCTCCTC GCCGCTGGCC
CCGCTCCACC TCGCGGTCGA GTCGCTGCGC CGGGGCGAGT GCCCGCTGGC CCTGGTCACC
CAGTCGTCCC CCGCCGAAGT CGTCGTGCTG CTGCTGGAAC GCCTCTCCGA CGCCACCCGC
GCGGGCCACC CGGTGCAGGC GGTGCTGCGC GGGTGCGCGG TGAACTCGAC CGGGGTGGCC
GACTCGGGCG CGCGGGAGCG GGTCGTCCTG GCCGCGCTCG CCGACGCGGG CCTGACGGCG
GCGGACGTGG ACGTCACCGC GCGGGCCACC ACCGGGCTCG GCGCGGTGGT GGAGCTGGTG
CGGGCGGTGC GGCACGGGGT CGTCCCACCC GGCGCGACGC CCTGGCCGCA GGGGGAGCGG
GCGCGGCGCG CGGCGGTGTC CGCCTTCGAG CCCCGCGGCG CCAACGCCCA CCTGGTCCTG
GAGGAACCAC CCGCCGACGA GCCGCCCCCC GACGAGCCGG CACCGGGCGG GGAGCGCGCC
GGGGCCGTGC CGTGGGCGCT GTCCGCGACC ACCGCCACCG CGCTGCGCGA GAGCGCCGAC
CGGCTCCGGA ACCACGTGCG CGCGGGCGGC CACGACCCCG CCGACGTCGC CTGGACCCTG
GCGCGCGGGC GCGGCGCGTT CGAGCACCGC GCGGTCGTGC TCGGGGCCGA CCGGGACGCG
CTGCTGACCG GGTTGGACGC GCTCGCCGAC GACCTCCCGG CGGAGAACCT GTTCCTGGGC
AGGGGTTCCG GGCACGCGCC GGTGTTCGTC TTCCCCGGTG CGGGGGAGTG GTGGGCGGAG
GTGGCGCGCG GGCTGCTCGA CGTGGACGAC GTGTTCACCG AGCACGTCGA AGCCTGCGCG
GCAGCGCTCG ACCCGCGCAC CGGGGTCTCC CTGCTGGACG TCCTGCGCGG CGAGGTGGCG
GCGGAACGAC CCGACGTGCG GCACGCCGCG CTGTTCGCGG TCACCACGTC GCTGGCGGCG
GTGTGGCGGG CGCACGGCGT CGAGCCCGTC GCCGCGGTCG GGGACGCCCG CGGCGAGATC
GCGGCGGCGT GCGCCTCGGG CTCACTCACC CTCGTGGACG CGGCCCGGTG GGTGGTGTCG
CCCGAGTTCG AGTCCACTGT GGACTTCGTG GGCTCGGTGC GCTCGCTGCT CGACGCCGGC
CACAGCCGGT TCGTGGAGCT GGCCCCGCAC CCCGCGCTCG CCACCGGCGC CGACCGCGTC
ACCGTGGGCA CCCCGCTCCG GGACGGCGAC CTGCTCACCG CGCTGGCCCG TGCGCACACC
GCCGGGATCG ACGTCGACTG GACCCGCGCC CTCACCGGCC GCCGCGCGCG GATCGTGGAC
CTGCCCACCT ATCCGTTCCA GCGACGGCCG CACCCGCCCG CGATCCCCGA GCAGGCCACC
GATCCCGCCG CGGGGGACCG GTCGACCTGG CAGCGGATCG GCGACCTCAC CGCCGCGCGC
CCGTCCGGCC ACTGGCTGGT GATCACCCCC GAGGGCGGGG TCGCGCGGGA GCTGCCCGAG
ACGCCCGGTT TCGCGCGGCT GGCCGTGGAC ACCACGACGG TCACCGCCGA CGACCTCGCC
GCCGCGCTCG ACCTCGGCCC CCTCGCCGGC GTGCTCTCCC TGCTGGGCCT GGACGAGCGC
CCGCACCCCG ACCTGCCGGA CGTCCCGCGC GGCCTCGCCG CGACCACCGA ACTGGTCCAC
GCCCTCGCGG GCAACCCGGC CCCGCTGTGG TGCGTGACCT CGGGCGCGGC CCCCGTCGAC
GGCGAGCGGG CCACCCCGGC GCAGGCGCGG CTGTGGGCGC TGGGCGCGGC CGTCGCCGCC
GAGCACCCCG AGCGGTGGGG CGGCCTGCTC GACGTCTCGG CGGACGTCGA CCCGGTCACC
GCCCTGGCCG CCGCGCTCGA CCACGACGAG GACCGGGTCG CGGCCAGGCG GTCCGGGCTG
TGGGCGCGCA GGCCCGTCCC GGCCTGCCGG ACCGCCGAAG CCGGTTGCCC ACCAACCGAT
CCCGACCTCG AAGACCTGGA CGACGAGCAG CTGTTCGCCC TGATCGACCA GGGCTTCGGC
CTCCGCTAG
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| Protein sequence | MTDQLRDYLK RVVAELHRTK EALVRERRRE PVAVVGLARR GPGGADFDAD FFGLSRPQAL
ALDPRQRSAL ESAWEVFEHA GVNPVTARGS GTGVFAGSAD RDPEPESADL PRGTSGRLAH
LLGFGGPALT VDTACSSPLA PLHLAVESLR RGECPLALVT QSSPAEVVVL LLERLSDATR
AGHPVQAVLR GCAVNSTGVA DSGARERVVL AALADAGLTA ADVDVTARAT TGLGAVVELV
RAVRHGVVPP GATPWPQGER ARRAAVSAFE PRGANAHLVL EEPPADEPPP DEPAPGGERA
GAVPWALSAT TATALRESAD RLRNHVRAGG HDPADVAWTL ARGRGAFEHR AVVLGADRDA
LLTGLDALAD DLPAENLFLG RGSGHAPVFV FPGAGEWWAE VARGLLDVDD VFTEHVEACA
AALDPRTGVS LLDVLRGEVA AERPDVRHAA LFAVTTSLAA VWRAHGVEPV AAVGDARGEI
AAACASGSLT LVDAARWVVS PEFESTVDFV GSVRSLLDAG HSRFVELAPH PALATGADRV
TVGTPLRDGD LLTALARAHT AGIDVDWTRA LTGRRARIVD LPTYPFQRRP HPPAIPEQAT
DPAAGDRSTW QRIGDLTAAR PSGHWLVITP EGGVARELPE TPGFARLAVD TTTVTADDLA
AALDLGPLAG VLSLLGLDER PHPDLPDVPR GLAATTELVH ALAGNPAPLW CVTSGAAPVD
GERATPAQAR LWALGAAVAA EHPERWGGLL DVSADVDPVT ALAAALDHDE DRVAARRSGL
WARRPVPACR TAEAGCPPTD PDLEDLDDEQ LFALIDQGFG LR
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