Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_4317 |
Symbol | |
ID | 8328514 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 5081610 |
End bp | 5082605 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 644944783 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003102016 |
Protein GI | 256378356 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAGGCGG GGCACGAGCG GGTGGAGGGC TCGCGGGAGG ACGGGGGTGA CGGGGGTCAG GTGGTGTTCG ACAGCACCGA CCTGGAGACC ACCGAGGAGT TCCTGATCAA GCACTACGCG CCGCTGCGGA TCGGCAGCTC GACGGGGCGG TCGGGGGCGC GCATCACCAG GGTGGCCGGT GGCGCCGTGA GCGCGGACGA GGTGGCGCTC ACGTTCGACA TGAACTACAG CGTGGAGCCG CTGGGCAAGA TCTGCCTGTG CGACATCCGG ACCGGCGTGA TCGACCGGCA CCGGCCCGCG GACTGGCGGG AGGCCGGGAC GTTCGGGCCG GGCGACCTGT TCTCGTTCGC CCAGCCGGAC CGGCCGTACC AGGGGCGCGC CCGCCAGGCG CGGTACAGCA TCACGATGCT GGACCCGGCG CTGCTGAACC AGGTCGTCGG CGGCGAGGAG CAGGTGCGGC TGCTGGACCA CCGCCCGGTC GACGCGGTGA CCGCGGCGAC CCTGCGGAGG GTGATCGACC ACGTGCGGGA CGACGTGCTG GCCGCGCCGG GGGCCACCGC GAGCCCGCTG CTGGTGGGGG CCGCGACCCG GTACCTGGCG GCGGCGGTGC TGGCGGCGTT CCCGACCACC GCGCCGGTCG GGCCGAGCGC GGCGGACAGC CGCGACGCGC ACCCGCGCAC GGTGCGCAGG GCGGTGGCGT TCATCGAGGC CAACGCGGGG CGGGACCTGA GCGCGGCGGA GATCGCGGCG GCGGCGCACG TGACGCCGCG CGCGATCCAG CTGGCGTTCC GCAGGCACCT GGGGACCACG CCGACCGCCT ACCTGCGGCG GGTGCGGCTG GACGGGGCGC GGGCGCAGCT CCTGGCGGCG GAGCCGGGCA GCACGACGGT GACCGAGGTG GCGCTGCGGT GGGGGTACAG CAGGCCGGGG GTGTTCAGCA CGCACTACCG GGAGGCGCAC GGGGAGCCGC CGTCTCGGAC GCTGCGGGGG CGGTGA
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Protein sequence | MEAGHERVEG SREDGGDGGQ VVFDSTDLET TEEFLIKHYA PLRIGSSTGR SGARITRVAG GAVSADEVAL TFDMNYSVEP LGKICLCDIR TGVIDRHRPA DWREAGTFGP GDLFSFAQPD RPYQGRARQA RYSITMLDPA LLNQVVGGEE QVRLLDHRPV DAVTAATLRR VIDHVRDDVL AAPGATASPL LVGAATRYLA AAVLAAFPTT APVGPSAADS RDAHPRTVRR AVAFIEANAG RDLSAAEIAA AAHVTPRAIQ LAFRRHLGTT PTAYLRRVRL DGARAQLLAA EPGSTTVTEV ALRWGYSRPG VFSTHYREAH GEPPSRTLRG R
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