Gene Amir_4287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4287 
Symbol 
ID8328484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp5049602 
End bp5050474 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content73% 
IMG OID644944754 
Productiron permease FTR1 
Protein accessionYP_003101987 
Protein GI256378327 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0672] High-affinity Fe2+/Pb2+ permease 
TIGRFAM ID[TIGR00145] FTR1 family protein 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.486354 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCACCC GGCGGCAGCG GGAGGTGGAC CGGGTGGAGC ACGTGTTCGG CAGCGCGTTG 
ATCGGGCTCA GGGAGGGCCT GGAGGCGGCG CTCGTGGTGA GCGTCCTGGT GGCGTACCTC
GTCAAGACCG ACCGGCGGCG CGAGCTGCGG TGGGTCTGGC TGGGCGTCGG GGTCGCGGTG
GCGCTGTCGG TGGGGGCGGG CGCGCTCGTC ACGTTCACGA GCGCCGCGCT GGACTTCCGG
GCGCAGGAGG CGTTCGGCGG GGTGATGTCG CTGATCGCCG TGGCGTTCGT GACCGGCATG
GTGTTCTGGA TGCGCGGCGC GGCGCGCGGG ATCGGCCGGG AGCTGCGCGG CAGGCTCGAC
GAGGCCACCG GGATCGGGCC GGTCGCCGTC GTGGCGCTGG CGTTCCTGAC GGTCGGCCGC
GAGGGCCTGG AGACGGCGGT GTTCTTCTAC GCCGCCGCCC AGTCCGCCGG GCGGAACGGC
GGGCCGCTCG CCGGGTTCCT GATCGGGCTC GCGATCGCGG TCGCGCTGGC CTGGGCGATC
TACCGGGGCG CGCTGAGCAT CGACCTGTCG AGGTTCTTCG CGGTCACCGG CGTGCTGCTG
GTGCTCGTCG CCGCGGGCGT CCTCGCCTAC GGCCTGCACG ACCTCCAGGA GGCGGCGCTG
ATCCCCGGAC TGGACGTGCT CGCGTTCGAC CTGTCCGGGC CGGTCCCCGA GGACTCCTGG
TACGGCGCGC TGCTCAAGGG CGTCTTCAAC TACTCGGCGC GCACGACCGT CGTCCAGGCC
ATCGCCTGGT CGGCGTACGT GGTGGTCGTG CTGCCGCTGT TCCTGCGTCC CGCGCGCACG
CGGGTCGCCC CGACACAGGG AGAAGTGAAG TGA
 
Protein sequence
MFTRRQREVD RVEHVFGSAL IGLREGLEAA LVVSVLVAYL VKTDRRRELR WVWLGVGVAV 
ALSVGAGALV TFTSAALDFR AQEAFGGVMS LIAVAFVTGM VFWMRGAARG IGRELRGRLD
EATGIGPVAV VALAFLTVGR EGLETAVFFY AAAQSAGRNG GPLAGFLIGL AIAVALAWAI
YRGALSIDLS RFFAVTGVLL VLVAAGVLAY GLHDLQEAAL IPGLDVLAFD LSGPVPEDSW
YGALLKGVFN YSARTTVVQA IAWSAYVVVV LPLFLRPART RVAPTQGEVK