| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4284 |
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| Symbol | |
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| ID | 8328481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 5045568 |
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| End bp | 5047532 |
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| Gene Length | 1965 bp |
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| Protein Length | 654 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 644944751 |
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| Product | heavy metal translocating P-type ATPase |
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| Protein accession | YP_003101984 |
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| Protein GI | 256378324 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.160773 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACCG TCGCGCCCGA ACGCCCCACC ACCCGCGCGC CCGCGCGCCG CACCCGGTGG
ACCGCGCTGC CCGAGGCCCG GTGGGCGGCG GTCTCGCTGG CGCTGTTCCT GACCGCGCTG
GCCGTGCAGC TCGCGGACGG CCCGGAACCG GTGCGCTGGG CGCTCTACCT GGCCTGCTGC
GCGGCGGGCG GGTGGGAGCC GGGCCTGTCC GGGCTGCGCG CGCTGCGGGA GAGGACCCTG
GACGTCGACC TGCTGATGGT GGTCGCGGCG ATCGGCGCGG TGGCCGTCGG GCAGGCGCTC
GACGGCGCGC TGCTGATCGT CATCTTCGCC ACCTCCGGCG CGCTGGAGGC CCTCGCCACC
GCCCGCACCG AGGACTCGGT GCGCGGCCTG CTCGACCTGG CCCCGGACAC CGCGACCCGC
GTCGGCGACG GCGCGGAGGA GGTCGTGCGG GTAGCGGATC TGGAGGTCGG GGACGTGGTT
CTGGTGCGCC CCGGCGAGCT GGTCCCGGCC GACGGGGTGG TGGTCGCGGG CGCGGGCGAG
GTCGACCAGG CCACGATCAC CGGCGAGCCG CTGCCGGTGG ACAAGGCCGA GGGCGACGAG
GTGTTCGCGG GCACGCTCAA CGGCACCGGG GCGCTGCGCG TGCGGGTCGG CAAGCGCGCG
GCGGACTCGG TGGTCGCGCG CATCGCTGCG GCCGTGGAGG AGGCGAGCCG GACCAAGGCC
CGCACGCAGC TGTTCATCGA GAAGGTCGAG CAGCGCTACT CGATCGGCAT GGTGGTCGCC
ACGCTGGTGA TCTTCACGGC GCCGCTGCCG TGGGGCGAGC CGGTGCGCGA GGCGCTGCTG
CGGGCGATGA CGTTCATGAT CGTCGCCTCG CCCTGCGCGC TCGTGCTCGC GACCATGCCG
CCGCTGCTGG CCGCGATCGC CAACGCCGGG CGGCACGGGG TGCTGGTGAA GTCGGCGGTG
GTCGTGGAGC GGCTGGCGGA CGCGGACCGG GTGGCGTTCG ACAAGACCGG GACGCTGACC
AGGGGCGAGC CGGAGGTGGC CGGGCTGCGC GCGCTGCCCG GCGCGGGGCT GGACGAGGAC
GCGCTGCTGC GGCTGGCCGC CTCGGCGGAG CACCCGAGCG AGCACCCGCT GGGGCGGGCG
GTGGTGCGGG CGGCCCGCGA GCGCGGGCTG GACGTGCCGC AGGCGCGGGA GTTCACCGCG
CGGCCGGGGC GGGGCGTGAG GGCGCGGGTC GGGGACCGGG TGGTGGAGAT CGGCTCACCG
GAGGCGCTCG GCGGTGCGGG GATCGGCGGT GCGGGGATCG GCGGTGCGGG GATCGGGGCC
GTGGACGGGT TCCTGACGCA GGGGCACACC GCCGTGCTGG TGCTGGTGGA CGGCGAACCG
GCGGGCGTGC TGGCCATCGC CGACCGGGTG CGCCCCGAGG CCGCGGCGGC GGTGGCCGCG
CTGACCGCCG CGACCGGGGC CGGGCCGGTG CTGCTGACCG GCGACAACCG CAGGACCGCC
GACCGGTTGG CCGAGCGGGT CGGCATCACC GACGTGCGCG CGGGCCTGCT GCCCGAGGAC
AAGGCCGAGG CGGTGCGCGC CCTGCAGGCC GAGGGGCGCC GGGTCGTGGT GGTCGGCGAC
GGGGTGAACG ACGCGCCCGC GCTGGCCGTG GCGCACGCGG GGGTGGCGAT GGGCGCGGCG
GGCGCGGACC TGACGCTGCG CACCGCCGAC GCGGTCGTGG TGCGCGACGA CCTGTCCACG
ATCCCGGCGG CGATCGCGCT GGCCAGGCGG GCGAAGCGGG TGGTGGTGGC GAACCTGGTG
ATCGCGGGGT CGTTCATCGT GGTGCTGGTG GCCTGGGACC TGCTCGGCGA CCTGCCGCTG
CCTTTGGGGG TGGCGGGGCA CGAGGGGTCG ACCGTGATCG TCGGGCTGAA CGGGCTGCGG
CTGCTGCGCG AGGCGGCGTG GCGGAAGGCG AAGGCCGAGG GGTGA
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| Protein sequence | MTTVAPERPT TRAPARRTRW TALPEARWAA VSLALFLTAL AVQLADGPEP VRWALYLACC
AAGGWEPGLS GLRALRERTL DVDLLMVVAA IGAVAVGQAL DGALLIVIFA TSGALEALAT
ARTEDSVRGL LDLAPDTATR VGDGAEEVVR VADLEVGDVV LVRPGELVPA DGVVVAGAGE
VDQATITGEP LPVDKAEGDE VFAGTLNGTG ALRVRVGKRA ADSVVARIAA AVEEASRTKA
RTQLFIEKVE QRYSIGMVVA TLVIFTAPLP WGEPVREALL RAMTFMIVAS PCALVLATMP
PLLAAIANAG RHGVLVKSAV VVERLADADR VAFDKTGTLT RGEPEVAGLR ALPGAGLDED
ALLRLAASAE HPSEHPLGRA VVRAARERGL DVPQAREFTA RPGRGVRARV GDRVVEIGSP
EALGGAGIGG AGIGGAGIGA VDGFLTQGHT AVLVLVDGEP AGVLAIADRV RPEAAAAVAA
LTAATGAGPV LLTGDNRRTA DRLAERVGIT DVRAGLLPED KAEAVRALQA EGRRVVVVGD
GVNDAPALAV AHAGVAMGAA GADLTLRTAD AVVVRDDLST IPAAIALARR AKRVVVANLV
IAGSFIVVLV AWDLLGDLPL PLGVAGHEGS TVIVGLNGLR LLREAAWRKA KAEG
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