Gene Amir_4169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4169 
Symbol 
ID8328362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp4905242 
End bp4905883 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content74% 
IMG OID644944633 
ProductAsp/Glu/hydantoin racemase 
Protein accessionYP_003101870 
Protein GI256378210 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4126] Hydantoin racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.0000394216 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACGC CCCGCCGCAT CGGCGTCATC CGCGTGGTCA CCTCCACCGA CCTCGACTTC 
CTCGGCGCGC ACGGACGCAT CCTGGAAGCC GAACTGGGCG TGACGACCCG CACCGCCTGC 
ATCCCGGACC AGCCACGCGG CGTCCACGAC GACGACTCGT TCGCCCTGGC GGACAGGAAA 
GTCCCACTCC TGGCCGAGGA ACTCGCCCCG CACGTGGACG CCATCGTGGT CAGCTGCGCC 
GCGGACCCCG GCCTCGCCGG AGCACGCGAC CGCGTGGCCA TCCCGGTCCT GGGCGCAGGA 
GCCTCCGCCG CGGGCGTCGC CCTGACCCTG GGGGAGCGGG TGGGCGTGCT GGACCTGACC 
ACGACCACCC CCGCATCGGT GACCAGGGTC CTGGGCGCCC GCCTGCACGG CGCCATCCAG 
CCCGACGGCG TCACCGAGAC CGCCCACCTC CTCACCCCCG AGGGCAAGCG GTCCAGCCTC 
GACGCAGGCC GCCGCCTGGT CGAGAGCGGC GCGGACGTCC TCCTGCTCGC CTGCACCGGA 
ATGACCACCA TCGGCCTGGC CGAACCACTC CGGCGCGCCC TGGGCGTCCC CGTCGTGGAC 
GCAGTCCGCA CCGCCGGACT CCTCGCCGCC AGCCCCTTCT GA
 
Protein sequence
MTTPRRIGVI RVVTSTDLDF LGAHGRILEA ELGVTTRTAC IPDQPRGVHD DDSFALADRK 
VPLLAEELAP HVDAIVVSCA ADPGLAGARD RVAIPVLGAG ASAAGVALTL GERVGVLDLT 
TTTPASVTRV LGARLHGAIQ PDGVTETAHL LTPEGKRSSL DAGRRLVESG ADVLLLACTG 
MTTIGLAEPL RRALGVPVVD AVRTAGLLAA SPF