| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4088 |
|---|
| Symbol | |
|---|
| ID | 8328281 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 4803494 |
|---|
| End bp | 4804423 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 644944553 |
|---|
| Product | alpha/beta hydrolase fold protein |
|---|
| Protein accession | YP_003101790 |
|---|
| Protein GI | 256378130 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.90454 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACAAGC ACAAGGTGCT GCTCGCGGTC GTCGCACTGG TCCTGACCCT GACCGGCGGC
GCGACCGCGA GAGCGCGCGA CCCGCTCGTC ACCGGCCTCG GCGCCGGCTT CACCTCCGGC
GTCGCCAGGG TCAACGGCAC GTCCCTGCAC TACGTCCGGG GTGGTCGCGG CCCGGCGCTC
CTGCTGGTCC ACGGCCACCC CCAGGACTGG TCCGAGTACC GGGCCGTCAT GCCGACCCTC
GCCAGGGACT TCACCGTCGT CGCCGTGGAC CTGCGCGGCA TCGGCGGCTC CGAGCCGACC
GAGGGCGGCT ACGAGGCCGC GAACCTGGCC GAGGACCTGC GCGCGCTGGC CGCCAGGCTC
GCGCTGGGCC CGGTGTACGT GGTCGGCCAC GACATCGGCG GCATGGTCGC CTACGCCTAC
GCGCGCCTCA ACCCGACCAC CACGCGCGGC GCGATGGTGC TCGACGTCCC GCTGCCGGGC
CTGTCCCCGT GGGACGAGAG CACCGCGCGG CTGTGGCACC TGGGCTTCCA CCAGGCGCCG
GGCCTGGCCG AGGACCTCGT CGACGGCAGG CAGGAGGTCT ACCTCAGGTT CGTGCTCGAC
CGGGAGACCT TCAGCGACGC CGAGGTCGCC CGCTACGCCC AGGCGTACCG GCCGAAGGCG
CGGCTGCGCG CCGGGTTCGA GCTGTACCGG GCGTTCCCGG CGAACGCGGC GTTCAACAGC
TCCCGGACCG GGCGCCTGGA CGTGCCGCTG GTGTGGGTGT CGGGGGACCG GTCGATCTTC
GCGGACATCG GCCCGCGCGT CGCCGAGGGC CTGCGCGCGG CGGGCTGCGC GAACGTGCGC
ACCGAGGTGG TGGCGGGCAG CGACCACTAC CTGCTCGACC ACCGGCCCGA CGCGGTGACC
GCCCTGATCC GGCGCTACGC CTCGCGGTGA
|
|---|
| Protein sequence | MHKHKVLLAV VALVLTLTGG ATARARDPLV TGLGAGFTSG VARVNGTSLH YVRGGRGPAL
LLVHGHPQDW SEYRAVMPTL ARDFTVVAVD LRGIGGSEPT EGGYEAANLA EDLRALAARL
ALGPVYVVGH DIGGMVAYAY ARLNPTTTRG AMVLDVPLPG LSPWDESTAR LWHLGFHQAP
GLAEDLVDGR QEVYLRFVLD RETFSDAEVA RYAQAYRPKA RLRAGFELYR AFPANAAFNS
SRTGRLDVPL VWVSGDRSIF ADIGPRVAEG LRAAGCANVR TEVVAGSDHY LLDHRPDAVT
ALIRRYASR
|
|---|
| |