Gene Amir_4047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4047 
Symbol 
ID8328240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp4758797 
End bp4759492 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content79% 
IMG OID644944517 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003101754 
Protein GI256378094 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCCGCGC CCCGCTCCCG CGCCGCCTCC GGCCTGCCGC CCGTCACGGC GTCCGCCGTC 
GTGGACGCGG CGGCGCGGTT GACCGTGCGG TCCGGTGTGG ACGGCTGGAC GGTGCGGCAG 
CTCGCGGCCG AGCTGGGCGT GGGCGCGCCC GTGGTCTACC ACCACGTCGG CGACCGGGAC 
CGGGTGGTCG CGGCCGTCGT CGGGCGGGTG CTCGCCTCGG TCCCGGTGCC CGACCGGGGG 
TTGCCGTGGC GGGAGTGGTT CACCGCCCTG CTGACCGACC TGCGGCGGGT CGCGCTGCAC 
CACCCCGGCG TGGCGCGCCG GGCGCTCGCG GTCGGGCCGG TGGCCCCCGA GTCCGCCTCG 
GCGGTGGGGG CCGGGATCGA GGTGCTCGTC GCGGCCGGGT TCGGGGACGA GGCGGTCGGG 
ATCTGCCGGT ACCTGGTCGA CTCGGCGCTC GCGCTCGTCT CCGTGGAGGA CGACCGCAAC 
GCCGACCCCG GACGCCGGGT GCGGCAGGCG GAGGCGGTCA TCGGGAGCGC GGACGGCGAG 
GGCGGGCTGG CGCTGGCGGG GGACTGGTTG CGGGCGCGGG GTTCCGACCC GAACACGCTG 
CGGGCCTACG ACGCCGAGCA CTTCCGGTAC TGCCTCGCCC GCTCGCTGGA CGGTGCCCAG 
GCCCGGCTCA CCACGCTGCG CCGCCGTCGC CGCTGA
 
Protein sequence
MSAPRSRAAS GLPPVTASAV VDAAARLTVR SGVDGWTVRQ LAAELGVGAP VVYHHVGDRD 
RVVAAVVGRV LASVPVPDRG LPWREWFTAL LTDLRRVALH HPGVARRALA VGPVAPESAS 
AVGAGIEVLV AAGFGDEAVG ICRYLVDSAL ALVSVEDDRN ADPGRRVRQA EAVIGSADGE 
GGLALAGDWL RARGSDPNTL RAYDAEHFRY CLARSLDGAQ ARLTTLRRRR R