| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4015 |
|---|
| Symbol | |
|---|
| ID | 8328208 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 4697316 |
|---|
| End bp | 4698173 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 644944487 |
|---|
| Product | Methylenetetrahydrofolate dehydrogenase (NADP(+)) |
|---|
| Protein accession | YP_003101724 |
|---|
| Protein GI | 256378064 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0190] 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.305417 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCCGTGC CCGCTCGGAC ACTCGACGGA ACAGCCGCGG CAGACGCGAT CTACGACTCC
ACCGCGGTCG CCGCGCTGGA GTTCACCGAG CAGCACGGCC GCGCGCCGCT GCTGGCCACG
GTCCTGGTCG GCGAGGACCC GTCGTCGCAG ACCTACGTGC GCATGAAGCG CTCCCGCTGC
CGCAGGGTCG GCATCGACTC GCGCGCGGTG GAGCTGCCCG CGTCGACCAC CACGGCCGAG
CTGGTCGCCA GGATCACCGA GCTGTCGCAG GACCCCGCCG TGGACGGCAT CCTGCTCCAG
CACCCGGTCC CGTCGCACGT CGACGAGCGG GCCGCGTTCG AGGCGATCGC GCCCGCCAAG
GACGTGGACG GCGTGACCAT GGCCTCCTAC GCGGCGATGG CGTTCGGCGA GCCGGGCTTC
CACTCGTGCA CGCCCGGCGG CATCCTGCGG CTGCTGGACG TCAACGGCGT CGACCCGGCC
GGGATGCACG CGGTCGTGGT CGGTCGCAGC CCGATCCTGG GCAAGCCGGT GAGCGCGCTG
CTGCTGGCCC GCGACGCCAC GGTCACCACC TGCCACTCCC GCACGAAGGA CCTCGCGGAC
CACGTGGCCC GCGCCGACCT AGTGGTGGCC GCGGTGGGCA AGCCGGAGCT GGTGCGCGGC
GAGTGGATCA AGCCGGGCGC GGTGGTCGTG GACGCGGGCT ACCACCCCGG CGGCATCGGC
GACGTGGACC AGGCGGGCGC GGCCGAGCGC GCGTCCTGGC TGACCCCGGT GCCGGGCGGT
GTGGGCCCGA TGACGATCGC GCTGCTGCTG GAGCAGACCG TGGCGGCGGC CAGGCGCCAC
GCCCGCGCGG CGGTCTAG
|
|---|
| Protein sequence | MPVPARTLDG TAAADAIYDS TAVAALEFTE QHGRAPLLAT VLVGEDPSSQ TYVRMKRSRC
RRVGIDSRAV ELPASTTTAE LVARITELSQ DPAVDGILLQ HPVPSHVDER AAFEAIAPAK
DVDGVTMASY AAMAFGEPGF HSCTPGGILR LLDVNGVDPA GMHAVVVGRS PILGKPVSAL
LLARDATVTT CHSRTKDLAD HVARADLVVA AVGKPELVRG EWIKPGAVVV DAGYHPGGIG
DVDQAGAAER ASWLTPVPGG VGPMTIALLL EQTVAAARRH ARAAV
|
|---|
| |