| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3986 |
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| Symbol | |
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| ID | 8328179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 4669702 |
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| End bp | 4670595 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644944460 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003101697 |
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| Protein GI | 256378037 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGACC AGCACGACCA CGCCACCCAC GAGCGGCACC CGAAGCCCGA GGACCAGCAC
GGGCAGAGCC AGCGGCACCC CGGCTCCGGG GAGGACATGG ACCCGAAGCC CGACCACGGC
GAGAGCACGT ACCGGGGGAG CGGGAAGCTC GACGGACGTC GGGCGGTGAT CACCGGAGGG
GACTCCGGCA TCGGCCGGGC CGTCGCCCTG GCGTTCGCGG CCGAGGGCGC CGACGTGCTG
CTGTCCTACC TGCCCGAGGA GCAGGAGGAC GCCGAGCGCA CGGCCGAGCT GGTGCGCGAG
CGCGGGCGCA AGGCCGTGCT CGTCGCCGGG GACATCACCG ACGAGCGGCA CTGCGGGGAG
ATCGTCGACC GGGCCCTGGG CGAGCTGGGC GGGATCGACG TCCTGGTGAA CAACGCGGCG
CACCAGATGG CGCAGGAGGA CGGGCTGCTC GGGATCAGCA GCGAGCAGTT CGACCGGGTG
CTGAAGACGA ACCTGTACGC GATGTTCTGG CTGTGCAAGG CGGCCGTGCC GCACCTGGAG
CCGGGGGCGA CGATCATCAA CACGTCGTCG ATCCAGGCCG TCGACCCGTC GCCGCAGCTG
CTGGACTACG CGACGACGAA GGCCGGGATC GTGAACTTCA CCAAGGGGCT CGCGATCGAC
CTGGCCGAGC GCGGGATCCG GGTCAACACG GTCGCGCCGG GGCCGGTGTG GACGCCGCTG
ATCCCGGCGA CGATGCCCGA GGATGCCGTG GCGAACTTCG GCGAGCAGGT GCCGCTGGGG
CGGGCCGCGC AGCCGGTCGA GCTGGCGCCC GCGTACGTGT TCCTGGCCTC GGCGGAGTCC
AGCTACATCA CCGGCGCCGT GATCCCGGTG ACCGGCGGCA AGCCGTTCAA CTAG
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| Protein sequence | MSDQHDHATH ERHPKPEDQH GQSQRHPGSG EDMDPKPDHG ESTYRGSGKL DGRRAVITGG
DSGIGRAVAL AFAAEGADVL LSYLPEEQED AERTAELVRE RGRKAVLVAG DITDERHCGE
IVDRALGELG GIDVLVNNAA HQMAQEDGLL GISSEQFDRV LKTNLYAMFW LCKAAVPHLE
PGATIINTSS IQAVDPSPQL LDYATTKAGI VNFTKGLAID LAERGIRVNT VAPGPVWTPL
IPATMPEDAV ANFGEQVPLG RAAQPVELAP AYVFLASAES SYITGAVIPV TGGKPFN
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