| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3984 |
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| Symbol | |
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| ID | 8328177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 4667269 |
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| End bp | 4669086 |
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| Gene Length | 1818 bp |
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| Protein Length | 605 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 644944458 |
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| Product | PBS lyase HEAT domain protein repeat-containing protein |
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| Protein accession | YP_003101695 |
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| Protein GI | 256378035 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1413] FOG: HEAT repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.187514 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGAAAGA TCGACTGGCA GTCCCTGGAA TGCCTCCACG GTCCCGCCGG GAACGTGCCG
GACCTGCTGG AGGAGTGCGC GCACGAGGAC CCGCTCCACG CGTTCGGCGC GATCGCCGAC
CTGGGCGACC TCCTGCGCCC CTCCCGCGCC CGAATCCTCT CCGCAGCCCC GGCGGCGCTC
CCGTTCCTGG TCGACCTGGC CGAGAACGGC CCGCACGCGC GCGAGCGGGT CGTGCGCCTG
ATCCGCCAGA TCGCCGAACG CGGCCACCCC ACCCCCGAGT GGACCGGGGC CCTGGACGCG
GCCCGGCCCG GCCTCCTCGC CCTCCTCACC GACCCGGACC CGCTGGTGCG CCGCCAGGCG
GGCAGGCTCC TGTCCTGCCT GGACCACCCG GAGGCCCTGA CCGCCCTGCG CGAGGGCTGG
GACACCGAGC AGGACCTCCG CGTGCGCTGC GACCTGGTGC GCTCCCTGGG CGGAGCGGAC
CCCGCCTTCG ACCTCACCGC ACTGCTCACC CACGACGACC CGCAGCTGTG CCTGGCAGCG
GCCCACGCCC TGCCCGCCAC CGCCGCGCTC CCCGACGCGA CCGCGCTGGC GAACGCCGTG
GCCTCACCGG ACAGCGCGGT GTGGGTCGAC TCCGCCTGGC TGGAAGATCC CCGCCACGAC
GACGCCCTCA CCGAGCTGGT CATCACCACC GGCGACCTCC TCGCCGAGGA CCCCGCCGCC
CTGACGGGCT ACGTCACCCT GGTGGCCCGC AACGGCATCG CCCCCCGCCG CGCGGCGGTC
CTTGGCTCAG CCCTGCGCCT GCTCTGCACC TGGCGCGACG TGGACCTGGT CCCCCTGCTG
GGAACCCTCC TCCACGACCC CCACCCCGCG GTCCGCTACC GAGCCGCGGC GGTCCTGGCC
TGCCTGGGCC CAGCCGCGCG CCCCCACGCC GACCGCCTGG CGGCCCTGCT CCAGGACCGG
TCGGAGCAGC CCGGCGAGTC GACCACGCAC ACCGCGGGCG ACATGGCCCT GTGGGCGCTG
GCGGCCCAGG GCGACCCGCG CTGCGTCCCC GCGCTGGTCG CCCTGCTGGA GAGCGACCGC
GTCCCGTTCG ACCTGAACAC CCACCGCCCC ACGAACCCCA CCCCCGTGAC CGCCTGCGGC
CCCTGGCTCC ACGAGCCCAC CGCCGAGGAG GTCCTCACCC CGCTGCGCGC GCACGCCGCC
GCCCTGGTCC CCCCGATCGC GGCCCGCCTG GCACGCCCCG ACCAGCACCG CCTGCTGGTG
GCGGCCCTGT GCCGGGTCCT GGCAGCCTGG GGCCCGCTCT CCGGCGAGGC CAAGTCCGCG
CTGGAACCCC TCACCGGCCA CCGCTACTAC GGCCGCTACG CGACGGCGGC CCTCAAGTCG
ATCGACGGCT ACACCGAGGC CGACGTCCCC GCCCTGGCGG GCGAGGCCCG CCGCTCCGGC
GTCACGATCG GCGTTCTGGG CGCGCTGGGC GCCGCGGCAG CGGAGGCCGA GGACACCCTG
CGCCGTCTGG CCACCCCGGA CGAAACGGCC TGGCGCCGCG TGGAGGCGTC CTACGCCCTG
TGGCGCGTCA CCGGCGAGAC CACGACCGCG GTCCCCCTCC TGCTGGAAGC CGCCGCTCCC
CTGGCGACCG GTGACTACAC CCGCCCGCGC GGGGCGGCCC TGCACCACCT GGCGGAGATC
GGCGTGCGCA CCGAGGAGGT CCTCGCCACC GCCCGAGCCG TGGCCACCAC CCGCCGCCGG
GTGGCGAACG TCGGCGACCG CGAGCGGATC GCCGAGGACG AGGCGCTGCG GGCATCAGCG
GCCCAACTGC TCGGATGA
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| Protein sequence | MRKIDWQSLE CLHGPAGNVP DLLEECAHED PLHAFGAIAD LGDLLRPSRA RILSAAPAAL
PFLVDLAENG PHARERVVRL IRQIAERGHP TPEWTGALDA ARPGLLALLT DPDPLVRRQA
GRLLSCLDHP EALTALREGW DTEQDLRVRC DLVRSLGGAD PAFDLTALLT HDDPQLCLAA
AHALPATAAL PDATALANAV ASPDSAVWVD SAWLEDPRHD DALTELVITT GDLLAEDPAA
LTGYVTLVAR NGIAPRRAAV LGSALRLLCT WRDVDLVPLL GTLLHDPHPA VRYRAAAVLA
CLGPAARPHA DRLAALLQDR SEQPGESTTH TAGDMALWAL AAQGDPRCVP ALVALLESDR
VPFDLNTHRP TNPTPVTACG PWLHEPTAEE VLTPLRAHAA ALVPPIAARL ARPDQHRLLV
AALCRVLAAW GPLSGEAKSA LEPLTGHRYY GRYATAALKS IDGYTEADVP ALAGEARRSG
VTIGVLGALG AAAAEAEDTL RRLATPDETA WRRVEASYAL WRVTGETTTA VPLLLEAAAP
LATGDYTRPR GAALHHLAEI GVRTEEVLAT ARAVATTRRR VANVGDRERI AEDEALRASA
AQLLG
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