Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_3924 |
Symbol | |
ID | 8328117 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 4605007 |
End bp | 4606827 |
Gene Length | 1821 bp |
Protein Length | 606 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644944404 |
Product | Carbamoyltransferase |
Protein accession | YP_003101641 |
Protein GI | 256377981 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2192] Predicted carbamoyl transferase, NodU family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCGGGAG CGGCACTCGG GATCTCGGCC TACTACCACG ACAGCGCGGC GGCGCTGGTG GACGCGGGCG GCGTCGTCGC GGCGGCGCAG CAGGAGCGGT TCAGCAGGCG GCGGCACGAC GCGTCGTTCC CCGACCTGGC CGTGCGCTAC TGCCTGGCGG AGGCGGGCGC GAAGCTCGAC GACCTCGACG CCGTCGCCTA CTACGAGGAC CCGCGGCTCA AGCTGCGCCG GGTGCTGGCG ACGTTCGCGG CGACCGCGCC CAGGGCGTGG CCCGCGTTCC GCGACGTGGC GCCGGAGTGG TTGGCGTGGA AGGGAAGGGC CGCGTCGGTG GTGCGGAACC GGTTGCGGGG GCTGGGCCTC GGCGCGGTGC CGCCGGTGCG CTGCTACCGC CACCACGAGT CGCACGCCGC GTCGGCGTTC CTGCCGAGCC CGTACGAGTC GGCGGCGGTG CTGTGCGTGG ACGGGGTCGG CGAGTGGGCG ACCACCAGCA TCTGGCACGG CCGGGGCGAG CGGGTGGAAC CGGTGGCGGA GCTGCGCTTC CCGCACTCGC TGGGGATGCT GTACTCGGCG TTCACCCACT TCTGCGGCTT CAAGGTCGAC TCCGGCGAGT ACAAGCTGAT GGGCCTGGCC CCGTACGGTA GGCCGGTCCA CACGCGGCTG ATCCGCGAGG AGCTGGTGGA CGTCAAGCCG GACGGCTCGT TCCGCCTGCA CACCACCAAG TTCGAGTTCC CGCGCGGCCG GGTGATGACC GGTCGGGCGT TCGAGGAGCT GTTCGGCGGA CCGCGCAGGC TCCCGGAGGG ACCGCTGACC GAGCGCGAGT TCGACCTGGC CGCCTCGGTG CAGCAGGTCA CCGAGGAGAT CGTGCTGGGA CTGGCGCGGG CCGCGCGCGA GCGGACCGGC GAGTCGAGGC TCTGCCTGGC GGGTGGGGTG GCGCTGAACT GCGTGGCCAA CGGCAAGCTC GCGCAGCGGG GGCTGTTCGA CGAGCTGTGG GTGCAGCCCG CCGCCGGTGA CGCGGGAGGC GCGCTGGGCG CGGCGCTGCT GGCGGCACGT CCGCCGCGTG CGCACGTGGC GGCCGGGAAG GACGCCATGC GCGGCGCGCG GTTGGGGCCG TCCTGCACCG ACGAGGAGGT CCGGGCGCAC CTGGTCGAGC GCGGCCTGCC GCACCACGAG CTGACCGCGC CCGAGCTGTC GGCGCGGGTG GCGGACCTGC TGGCGCGCGG CAAGGTGGTC GCCTGGTTCC AGGGCCGGAT GGAGTTCGGG CCGAGGGCGC TGGGGTCGCG CTCGATCCTG GGCGACGCGC GGGACCCGCG GATGCAGTCG ACGATGAACT TGAAGATCAA GTTCCGGGAG TCGTTCCGCC CCTTCGCACC CGTGGTGCTC GCCGAGGACG CCGCCGACTA CTTCGACCTG ACCCAGCCGA GCCCGTACAT GCTGATCGTG TCCGGGGTCG CGGAGGCGCG CCGCCTCCCG GAGGAGGCCG ACCTGACGGG TCTGGACCGG TTGCGCGCCA AGCGGTCCAC CATCCCGGCG GTGACGCACG TGGACCACTC GGCGCGCGTG CAGACCGTGA CCGCCGACAC CGATCCCCGG CTGCACGCCC TGCTCACCGA GTTCAAGTCC AGGACCGGCT GCCCGGTCCT GGTCAACACC TCCTTCAACG TCCGGGGCGA GCCGATCGTC GCCACCCCGG AGGACGCCTA CCGCTGCTTC ATGCGCACCG ACGTCGACGC GCTCGCGATC AACGACTTCC TGCTGCTGAG AGCGGACCAG CCGCCGTGGC GCGAGGAAGC CGACTGGCGC GACGAGATCC CCCTGGACTG A
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Protein sequence | MAGAALGISA YYHDSAAALV DAGGVVAAAQ QERFSRRRHD ASFPDLAVRY CLAEAGAKLD DLDAVAYYED PRLKLRRVLA TFAATAPRAW PAFRDVAPEW LAWKGRAASV VRNRLRGLGL GAVPPVRCYR HHESHAASAF LPSPYESAAV LCVDGVGEWA TTSIWHGRGE RVEPVAELRF PHSLGMLYSA FTHFCGFKVD SGEYKLMGLA PYGRPVHTRL IREELVDVKP DGSFRLHTTK FEFPRGRVMT GRAFEELFGG PRRLPEGPLT EREFDLAASV QQVTEEIVLG LARAARERTG ESRLCLAGGV ALNCVANGKL AQRGLFDELW VQPAAGDAGG ALGAALLAAR PPRAHVAAGK DAMRGARLGP SCTDEEVRAH LVERGLPHHE LTAPELSARV ADLLARGKVV AWFQGRMEFG PRALGSRSIL GDARDPRMQS TMNLKIKFRE SFRPFAPVVL AEDAADYFDL TQPSPYMLIV SGVAEARRLP EEADLTGLDR LRAKRSTIPA VTHVDHSARV QTVTADTDPR LHALLTEFKS RTGCPVLVNT SFNVRGEPIV ATPEDAYRCF MRTDVDALAI NDFLLLRADQ PPWREEADWR DEIPLD
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