| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3900 |
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| Symbol | |
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| ID | 8328093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 4581892 |
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| End bp | 4582767 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 644944383 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_003101620 |
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| Protein GI | 256377960 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGGTCG AGTCGCGTCC GCTGCGGTAC TTCGTCGCCG TCGCGCAGGA GCTGAACTTC
GCCCGCGCCG CCGAGCGGCT GGCGATCTCC GCGCCGCCGC TGTCCCGCGC GATCCGCAAG
CTGGAGGCGG ACCTCGGCGT GGTGCTGTTC GAGCGGGACA CCCACCGGGT CGCCCTCACC
CCCGCCGGGC GGGTGCTGCT GGAGCAGGCG CGGCGGGCGC TGGAGGCGCT CGACGCGGCC
GTCGCGCGGA CCCGCAGGGC GGGCGAGGAC GAGCCGAAGC TGGTGCTCGC GGTGAAGGCG
GACAGCGACG CGGGCCTGCT GACGGCGATC CTCGACCGGT TCGCGGCGCA GCAGGACGCG
ACGCCGGTGT CGGTGCGGCT GTGCGGCTGG AACGAGCAGG CCGGGCTGCT GCGCCGGGGC
GAGGCCGACG TGGCGCTGGC GCACCGGCCG TTCGACGAGA CCGGCCTGGA CTGGGAGGTG
GTCGCCGCGG AGCGCCCGGT GGCCGCGGTG CCGGTCGCGC ACCCGCTGGC GGGCCGGGAC
TCGGCGACGC TCACCGAGCT GGACCTGCCG TTCCGCACCG ACGACGAGTT CGGGCGGCAC
CGCGAGGCGC TCGTGGCGCG GCACGGGGTC CGCGACCTGC CGCAACTGCT GAAGCTCGTG
GAGCTGGGCG AGTTCGTGAC GCTGGTGCCG GACTCGGTGG CGGTCCGCTA CCCGCGTCCG
GGCGTCGCCT ACCTGCGGGT CCCGGACGCG CCACCGGTCG AGCTGGCGGT GGTGTGGCCT
GGGGAGTCCC GGTCGCGGGC GGTGGCGGCG CTGGTGCGCG CAGCGGTAGC CGCGCACGAC
GTCACCGCTG CGACGAGTGG ATCTGGGGCT GCTTGA
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| Protein sequence | MPVESRPLRY FVAVAQELNF ARAAERLAIS APPLSRAIRK LEADLGVVLF ERDTHRVALT
PAGRVLLEQA RRALEALDAA VARTRRAGED EPKLVLAVKA DSDAGLLTAI LDRFAAQQDA
TPVSVRLCGW NEQAGLLRRG EADVALAHRP FDETGLDWEV VAAERPVAAV PVAHPLAGRD
SATLTELDLP FRTDDEFGRH REALVARHGV RDLPQLLKLV ELGEFVTLVP DSVAVRYPRP
GVAYLRVPDA PPVELAVVWP GESRSRAVAA LVRAAVAAHD VTAATSGSGA A
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