| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3743 |
|---|
| Symbol | |
|---|
| ID | 8327933 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 4400555 |
|---|
| End bp | 4400932 |
|---|
| Gene Length | 378 bp |
|---|
| Protein Length | 125 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644944232 |
|---|
| Product | anti-sigma-factor antagonist |
|---|
| Protein accession | YP_003101472 |
|---|
| Protein GI | 256377812 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
|---|
| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGAGC GCGTCCCGAT CCTCAAGATC GGCGACGTCC TGCTGGTGTC GATCCAGATC
GACCTGCAGG ACCAGAGCGT CCTCGCGCTC CAGGAGGACC TCGCCGAGAA GATCAGCGCG
ACCGGCGCGC ACGGCGTGGT CATCGACATC TCCGCGGTGG AGATCGTCGA CTCGTTCATC
GGCCGCATGT TCGCCACCAT CGCCTCGATC TCCAAGCTGT TCGACGCCGA CACCGTCGTC
GTCGGGATGC GCCCGGCCGT CGCCATCACC CTGGTGGAGC TCGGGCTCAC CCTCGGCGGG
GTGCGCACGG CCCTCGACCT GGAGCGCGGC ATGAAGATCC TCGGAGTGCT CGGCAGGCAG
CGCCGAGGCG AGCGGTGA
|
|---|
| Protein sequence | MVERVPILKI GDVLLVSIQI DLQDQSVLAL QEDLAEKISA TGAHGVVIDI SAVEIVDSFI
GRMFATIASI SKLFDADTVV VGMRPAVAIT LVELGLTLGG VRTALDLERG MKILGVLGRQ
RRGER
|
|---|
| |