| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3674 |
|---|
| Symbol | |
|---|
| ID | 8327864 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 4290517 |
|---|
| End bp | 4293099 |
|---|
| Gene Length | 2583 bp |
|---|
| Protein Length | 860 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 644944164 |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_003101404 |
|---|
| Protein GI | 256377744 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1020] Non-ribosomal peptide synthetase modules and related proteins |
|---|
| TIGRFAM ID | [TIGR03605] SagB-type dehydrogenase domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATGG CTGATCGCGG GTTGTCGCTG CTCCCCGCCG AGCAGCGGGA GCTGCTGCGC
GGCATGAACG GGCTGACCGG CGAGGTCCCG CCGGGAACGG TCGTGGACGC CGTGGTCGCC
TTGGCGGCCG AGCGCGGCTC GGCCCCCGCC GCGCGGGAAT CGGCGCGGGA GTTGGCCCGC
GCCGACCTGC TCGCGGCGGC CGACCGCCTG GCCGCCGCCC TGCTGGAGCG GAACGTGACG
GCCGGTCAGC GGGTGGCCCT GTGCGTGGAA CCGGGCGTCG ACCAGCTCGT CGGGGTGCTC
GGCGTCCTCC GTGCTGGCGC GGTGGTGCTG CCCGTCGACC CTGCGGCCGG GCACGTCCTC
CGCTGGCGGG CGGTCGAGCG GGCCGACGTG GCCGTCCTGG TCTCCCAGCG CTCACTGCTC
GACCAGCTGC GCTGGCCGGA GCGCTTCGAC GTGCTCGCGG TCGACGACCT GCCGCAGGCG
CGGACGCGGG CGACCTGCTC TGGGCGGAAC GACGGCCACG ACGTCGCGTT CGCCATCGGC
GAGGCCGGAA CCGCCCTGCG GCACCGGGAC CTGCTCAACC TGGCCGCCGA CCTGGCGGAC
CGGTTCGGCC TCGGCCAGGA CGACCGCCTG GCGGCGTTCA CCCCGGTGAC CTCAGGGCGG
GGCGCCCAGG AGACCGCGCT CGGCCTGCTG ACCGGGATGA CGCTGGTCTT CGGCGACGCC
GCCGAGCTGC TGCGGCCCGC CATCTGGCCC GCTCTCCTGG AGCGGGAGCG GGTCACCGTG
TGGCACGGCA CGCCCTCCCA CCTCGACCTG CTGGTCACCG AGATCGAGGA CCGCGGCGAG
CGCCTGCCCG AACGGCTGCG GCTCGTCCTG GTCAGCGGCG AGCGGCTCCC CTCGGACCTC
GTCCAGCGGC TCCGCGACCT CGCGGACTCG GAGATCACCG TCGTGAACCT GTCCTCCGCC
CAGCCCGACG GTCCCTGGGT CGCCTGCCAC CCGATCGTCG GCGCGGCTCC GGTGACGCCG
ACGGCGCCGA TCGGCAGGCC GCTGCGCAAC CAGCGCGTCC ACGTGCTCGC CGAGAACGGC
GGCGACTGCC CCGTGTGGGT CACCGGGCAG GTGCACTACG GCGGACTGGT GGCCGAGCAC
CTCGACGGCC GGGACGACTC CGGCGCCACC CACCAGGAGA CCGGCGAGAT GCTGCTGCGC
GCCGCCCAGT ACGGGCGGGT GCTCCCGGAC GGCGTCGTGG AGGTCGTGGG GGACGCCTCG
GCGCAGCTGG TCGTCCACGG TCGGCGGTTG CACGTGCACG ACACCGAGGT CGCCCTGTCC
GCGATGCCCG AGGTGCGCGC GGCCGCGGTG GTGACGGTCG CGGACGGCTC CGAGTCCCTG
GGCTTCGTGC GCCTGCGGGC GGAGGCCAGC GCGGCTGACC TGCTCGACCG GCTGCGCCGC
AAGGTCTCGC CCTACCTGCT CCCCGCCCGG ATCGAGGTCT TGGACCGGTT CCCGCTCACC
GCGGACGGAC GCGTGGACCG ACCTGCGCTG GCCGCGACGC GCGCCCCGGC CGCGACCCGA
CCCGCGCGGT CCGGGACCGC GCCCGCGGGG GGAACCGGCG CGGAGCTGCT CGCCGCCGCC
ACCGCCATCG CGTGCCGCGT GCTCGGCGTG GACGAGATCG AGCCGGACGC GAACCTCCTC
GAACTCGGCG CCACCTCGGT CGAGCTGGTG CGGCTGGCCA CGCTCGCCGA GGACGAGCTG
GGCATCGAGG TGGAGGTGGA GGAGCTGCTG GGCTTCCCCT CGATCTCGGT GCTGATCGGC
CCGCACCTGT CCAGGATCGC CGAGCCGGCG CAACCGGAGC AGGTGCCCGA GCGCCCCCGT
GACGAGACCG AGGACCTGCT CGTCGGGGTG GGGAGGAGGC AGGCATTCAA GGACGAGCGC
ACGGGCGTGC GGCACGAGCA CGACCGGACG GCGGGCATCG GCCTCGGGGG GAGCGGCGAC
CCCAGGGCGC TCGCCCGCCG CAGCGAACGG CGCTTCTCAC CCGCGCCGGT GGTCTTCGCC
GACCTCGCGC TGCTGCTCGG CGCCCTGCGG TCGACCGACC TCGGCGGCGA GCGCAAGTTC
TGGTACCCGT CCGCAGGCGA CGCCTACCCC CTGGGCGCCT ACCTGGAAGT CGCGCCGCAT
CGCGTGCAAG GGCTCGACGC GGGCATCTAC TACGTGCACC CGGACCGGGC TGAGCTCGTG
CCGGTCACCG AGGGTGGTCG GGTCCCCGCG ACCGCCCACG CCGATCTCAA CCGCGCCGCG
CTGGACGAGT CGGCCTTCGT GATCCACCTC GTCAGCAGGA TGAACGCGAT CACCCCGCTC
TACGGCGACC TGGCATGGGA CTTCTCGGTG TTCGAGGCGG GGGCGATGAC CCAGCTGCTG
ATGTCGGTCG CCGCGGAGAC CGGCCTCGGG CTCTGCCCTG TTGGCACGCT GGACACCAGC
GAGCTGCCCG AGCCGCTGCG GCTGCGGCCC CACGACCGGT TCGTGCACGC TCTGCTCGGC
GGCATCCCGG CTCGGCGACC CGACGGCGAC CGCTCCGGCC AGGGCGTCGG GACGTGGCTG
TGA
|
|---|
| Protein sequence | MSMADRGLSL LPAEQRELLR GMNGLTGEVP PGTVVDAVVA LAAERGSAPA ARESARELAR
ADLLAAADRL AAALLERNVT AGQRVALCVE PGVDQLVGVL GVLRAGAVVL PVDPAAGHVL
RWRAVERADV AVLVSQRSLL DQLRWPERFD VLAVDDLPQA RTRATCSGRN DGHDVAFAIG
EAGTALRHRD LLNLAADLAD RFGLGQDDRL AAFTPVTSGR GAQETALGLL TGMTLVFGDA
AELLRPAIWP ALLERERVTV WHGTPSHLDL LVTEIEDRGE RLPERLRLVL VSGERLPSDL
VQRLRDLADS EITVVNLSSA QPDGPWVACH PIVGAAPVTP TAPIGRPLRN QRVHVLAENG
GDCPVWVTGQ VHYGGLVAEH LDGRDDSGAT HQETGEMLLR AAQYGRVLPD GVVEVVGDAS
AQLVVHGRRL HVHDTEVALS AMPEVRAAAV VTVADGSESL GFVRLRAEAS AADLLDRLRR
KVSPYLLPAR IEVLDRFPLT ADGRVDRPAL AATRAPAATR PARSGTAPAG GTGAELLAAA
TAIACRVLGV DEIEPDANLL ELGATSVELV RLATLAEDEL GIEVEVEELL GFPSISVLIG
PHLSRIAEPA QPEQVPERPR DETEDLLVGV GRRQAFKDER TGVRHEHDRT AGIGLGGSGD
PRALARRSER RFSPAPVVFA DLALLLGALR STDLGGERKF WYPSAGDAYP LGAYLEVAPH
RVQGLDAGIY YVHPDRAELV PVTEGGRVPA TAHADLNRAA LDESAFVIHL VSRMNAITPL
YGDLAWDFSV FEAGAMTQLL MSVAAETGLG LCPVGTLDTS ELPEPLRLRP HDRFVHALLG
GIPARRPDGD RSGQGVGTWL
|
|---|
| |