| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3658 |
|---|
| Symbol | |
|---|
| ID | 8327848 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 4271933 |
|---|
| End bp | 4272751 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644944149 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003101389 |
|---|
| Protein GI | 256377729 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.421046 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCTGGCGC TGTGCCGGGC GCAGGAAGCG CTGGGCCGGT TGGACGAGGT GGCGCACCGC
TCCCCGTTGG GCAAGGGCTG GGGACATGCG GTCCGCCTGC GCGAGGTGCA GCAGTTGGCA
CACCTGCACG GGATCCACGT GTCGTTGCGC GAGGTCTGGC AGACTCAGTT GCCCGGCAGC
ACAACACGAA TCGCCACCGT GCCCATGGTG CGCCCCTACC TGGACGCCGT TATGGGCGAG
TGCCCAAGGT GGTTGTCAGA ACTAGGCGGC ACCATGCCGC GAAGCGCGCA GACCGCGCTG
TGGCACTTGC GAATGCTGAG AAGGGGAACC GCTCCGGCAT TCGACAGGCT TCCTGCGATG
CTGGCGGCAG TAGGCGCACT GCGAGACGTC TGGTTGCCCC TGGTCACCGC GATCACCGCG
CACCCCACCG ACTACCTGGC CGCGCTGCAC ACCACAACCC AGACCGACAG CGCCGACCCG
CTGGTGTCCC ACTTCGCCCA CAGCATCGTC AACGCCTGCC ACGCGGAGAT CACGCTGATC
GACCGCCTGA CGGCACTGCG CACACACCTG CTCACCACCG CCCGCGGGCA CACCGGACAC
ATTCTGGAGG TCATCGCAGC ACTAACCACC ACACCGGTGC TGAACAACCG CTGGATCAGC
GAACAGCACA AGATCACCAC GAAGGCCGCC ACGAACATCA CCGACACCTT GGTCTCCCAA
GGCATCCTGG CCCCACACCC CTACTTCAAA TGGGGCGCAG TTTTGCCCTG CGCCTGCACT
GAGCCCTTTT CATCCTGGGC TGGATGCGTT GCCGTGTAG
|
|---|
| Protein sequence | MLALCRAQEA LGRLDEVAHR SPLGKGWGHA VRLREVQQLA HLHGIHVSLR EVWQTQLPGS
TTRIATVPMV RPYLDAVMGE CPRWLSELGG TMPRSAQTAL WHLRMLRRGT APAFDRLPAM
LAAVGALRDV WLPLVTAITA HPTDYLAALH TTTQTDSADP LVSHFAHSIV NACHAEITLI
DRLTALRTHL LTTARGHTGH ILEVIAALTT TPVLNNRWIS EQHKITTKAA TNITDTLVSQ
GILAPHPYFK WGAVLPCACT EPFSSWAGCV AV
|
|---|
| |