Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_3655 |
Symbol | |
ID | 8327845 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 4268681 |
End bp | 4270816 |
Gene Length | 2136 bp |
Protein Length | 711 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644944146 |
Product | Radical SAM domain protein |
Protein accession | YP_003101386 |
Protein GI | 256377726 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCTGG ACCGAACGGG GGAAGCCGTG GTCGAGATCA TTTTCGGTCA GCTCCAGGAC AACCCTGCCG CCACGCTGCG CACCAGATTG ATCGCCCTCG GTTTCCCCGA TGTCGGCGAG GTGCCTTCAT TGCTCCTCAC CTCTCCCAGC GCGTTGGGCG GCTTCCTCTC CGAACGCACC AAGGACGAGT TCCGCGTCAT CGGCCCGGTC GACGGCCGCC TGGTCCTCGC CCGACGCACC GGAGAGGACC AAGCACACGT CATCGCGCTG GGCCCCGCAC CCGCACTCCC CCACTGGCTG AGCACCCACC TCCACGGCAC GGCCGACGAT CCCGCCGGAA CCACCCTGGA CCTCACCGAC GAAGTGCTGC GCCGCCTGTC CCGTCCACGC GTGCTGTTGG TCGCGCTCTA CCACCCGGAG AACTTCCCGC TGCCGCGCTT CGCCCTGTCG ATCTCCGATC TGGCCCGCTC CATCCGCGCC ACGTTCAGCG GTGAGGTCGA TCTGCTGGAC ATGCAGTTGG GGACCACGAC CGAGGAGATC GTCGACCAAG CCCGCAGCGG TGACTACGAC ATCGTCGGCA TCTCGGCGAC CTTCGGCCAG CACGACATCA TGACCACGGT CCTGGACTCC CTCACCGTCC AACCCACGCG CCCCCTGCTG GTCGCGGGCG GCAGCCTCAC CGCCCGCAAC GAGAAACTGC TCCTGGCGCG TTACCCCGGC CTGCTGCTAG CGCGCGGAGC CGGGGAGCAG ACGATGGCCG ACCTGGTCCA CCACTGGCAC GGAGACCTCT CGCTGGCCCA GGTCACGGGC ATCCGCAAAC CGTCCGCAGC GCCGGTCCTG CTCGCCCTGG GAAGGTCCGC GTCCCCACGC CCCCAGGAGA TCCACCCGGA ACTGGACCTG CTGCCCGCCA CGCTCGACCG CGGCGGCGTC GTCCAACTGG AAGCCTCACG GGGCTGCACG AACTACTGCT CGTTCTGCCC ACGCGGCCAC AAGGGGATCT GGAACGGCTC CTCCCCCACC GCGCTGGCGC CGATCGTGCG GGAGTGCGCG CGGGTGTTCG ACCACTACCT CGAGGTCTCC AGAACCATGT ACCTGGTCGA CGAGGAGTTC ATCGGCCGCG ACGACGACTC ACCCCGACGC GCCGTCGAGG TGGCGCGCGT GCTGGCCGAG CACGGCTTCG CCTGGGAGAG CAGCTGCCGC ATCGACCAGG TCGTGGACCC CGCGCACGAC CTGGCCTGGC ACGCAGACCG CGCCAGGCTG TGGCGGGAAC TGCTGGCCCT GCGGTTGCGC CGCTGCCTGT TCGGCATCGA GTCAGGCGTG ACCAGCGTGC TGGAGCGCTT CGCCAAGCAG ACCACCGCCG AGCAGAACGC GCTGGGCATC CGCACCCTGT CGGCGCTGGG CGTCCCCACC CGGTTCACCT ACATCACCTT CGACCACCTG ATGACCTTCG ACGAACTCCT CGCCACCCAC CGCTTCCAGG GCCGCACCGA CCTGCTGCTG CGCCCACAGC CGCAATTGAG CGCGGAGGAG CTCGTGCGGG CCGTGCGCGA TGAGGACTTC GTCGCCCGCA ACAGCACCGG GAAACCCTTC TACACCGGCA TCTCCTACCA GCTTGTCGGC ATGGAGTGCC TGATCGGCGC CGCCTACACC CGCCGCGTCC AGGCGACGGG CCTGGCCACC GGGACCAACC CGCTCATGGG GCGCGTCGAC GCCGACTACG CGGACTGGCG CATCGGCGCG GTGGCGGAGG CCGGGCAGCG CTGGGTCGAC CGGAACTTCG CGCTCGACTA CACGCTCAAG TCCTTGGAGA AGGTGCTGGA CGGGCAGGCG CGGCGCAGCG TGCGCACGGC CCGCGTCGTC CTCAAGGACG CCGCGTATGA CCTGCTCGGC GCGATGATCG TCGCCCAGGC CGACAGGTCG ATGAATCCAA GCGACGCAGA AGTCGCTACC GTCACAGCGG AACTGCGCGG GTTGCTCGAC GAGACAGCAG CTTCAGTGGA ACGCTCCTTC GGAGCCGTCC TGCCCGCGCT GCTGGAGGCC CTGCCTTCCC CACACGCTGA AACGCTGCGC CGCGAGCACT CCACCTGGTT GGGAAAAACC GGCTGGAGGC TGATCAACAC TGCCGGTTCG TGCTGA
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Protein sequence | MTLDRTGEAV VEIIFGQLQD NPAATLRTRL IALGFPDVGE VPSLLLTSPS ALGGFLSERT KDEFRVIGPV DGRLVLARRT GEDQAHVIAL GPAPALPHWL STHLHGTADD PAGTTLDLTD EVLRRLSRPR VLLVALYHPE NFPLPRFALS ISDLARSIRA TFSGEVDLLD MQLGTTTEEI VDQARSGDYD IVGISATFGQ HDIMTTVLDS LTVQPTRPLL VAGGSLTARN EKLLLARYPG LLLARGAGEQ TMADLVHHWH GDLSLAQVTG IRKPSAAPVL LALGRSASPR PQEIHPELDL LPATLDRGGV VQLEASRGCT NYCSFCPRGH KGIWNGSSPT ALAPIVRECA RVFDHYLEVS RTMYLVDEEF IGRDDDSPRR AVEVARVLAE HGFAWESSCR IDQVVDPAHD LAWHADRARL WRELLALRLR RCLFGIESGV TSVLERFAKQ TTAEQNALGI RTLSALGVPT RFTYITFDHL MTFDELLATH RFQGRTDLLL RPQPQLSAEE LVRAVRDEDF VARNSTGKPF YTGISYQLVG MECLIGAAYT RRVQATGLAT GTNPLMGRVD ADYADWRIGA VAEAGQRWVD RNFALDYTLK SLEKVLDGQA RRSVRTARVV LKDAAYDLLG AMIVAQADRS MNPSDAEVAT VTAELRGLLD ETAASVERSF GAVLPALLEA LPSPHAETLR REHSTWLGKT GWRLINTAGS C
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