| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3550 |
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| Symbol | |
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| ID | 8327740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 4123340 |
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| End bp | 4124458 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644944047 |
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| Product | glycoside hydrolase family 25 |
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| Protein accession | YP_003101287 |
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| Protein GI | 256377627 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3757] Lyzozyme M1 (1,4-beta-N-acetylmuramidase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0276847 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATCCGTT CGGCCCTCCG GGTACGTATC CGACCAAGAA GCGCGTCCCC TGCCACCGAC
CCCACGAGGA GGTCGCCCGT GATCTACGGA GTCGACGTAT CCGCATACCA ACCGGGTTTC
GACTTCGCCG CCGCGCGTTC CGAGGGCTTC GACTTCGCCT TCATCAAGGC CACCGAGGGC
TCCACCTGGC GTTCACCGAA CTACCACGAC CAGCTCGCCC GCGCCCGGTC CGCCGGGATG
CTCGTCGCCG CCTACCACTA CATGCGCGGC GACGACGTGG GCGGGCAGCT CGGGAACGTG
CGGGCGGTGG TCGGCACCGA CGTGCCGCTG CTGCTCGACA TCGAGGACGG CGCGGGCTCG
CTCGGGGCCA TCCGGGGCCT CGTCGACCAG GCCCGCGCCT CCGGGTACGG GTCGCCGCTG
ATCTACCTGC CGCAGTGGTA CTGGTCGGGC CGCATGGGCT CGCCGGACCT GTCGGGACTG
CCCCCGCTGT GGCACTCGCG GTACCCGGAC AACGTGGTGC GCCGCAAGGA GCAGTTCGCG
CTCGGCGACG AGTACTGGCC CAGCTTCGGC GGGCTGCGCA CCGAGATCGC CCAGTTCACC
TCGTCGCTGG CCGTCGCCAA CTACCCGAAC GGGCGAATCG ACGGCAACGC CTACCGGGGC
ACCCGCCAGG AGCTCCAGGA CCTACTCGAA GGGGACAACA TGCCCAGTGC GCAGGAGATC
GCCTCCGCGG TGGTCAACGA GATGGAGCAG CGCCGGTACG ACACCGACGG CGACGGCCAG
CCCGACCGGT CGCTGATCAA CAACACCATC CAGGGCATGT GGAGCGCGCA GGGCGCCGAG
GCGACCGCGC GGCGGGTGGA GGTCAAGCTC GACGCGCACT CGGAGGGGCT CACCGAGGAG
GAGGCCAACC TGCTGGCCTC GTTGCGCACC AACAAGGAGG GGCTGAGCGC GCGGCGGCAG
GCGCAGGTGC TGCGCAGCCA GCTGACGCCC GCGGTGCTGG CCGAGCTGGT GGCGCTGGCG
CAGGAGCCGA GCAGGCCCGC GCCCCAACCG CCGGTGGGAC AGCCTCCGGT GGGACAGCCC
TCCGTGGTTC AGCCTCCCGC TCAGGAACCG ACCGCCTAG
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| Protein sequence | MIRSALRVRI RPRSASPATD PTRRSPVIYG VDVSAYQPGF DFAAARSEGF DFAFIKATEG
STWRSPNYHD QLARARSAGM LVAAYHYMRG DDVGGQLGNV RAVVGTDVPL LLDIEDGAGS
LGAIRGLVDQ ARASGYGSPL IYLPQWYWSG RMGSPDLSGL PPLWHSRYPD NVVRRKEQFA
LGDEYWPSFG GLRTEIAQFT SSLAVANYPN GRIDGNAYRG TRQELQDLLE GDNMPSAQEI
ASAVVNEMEQ RRYDTDGDGQ PDRSLINNTI QGMWSAQGAE ATARRVEVKL DAHSEGLTEE
EANLLASLRT NKEGLSARRQ AQVLRSQLTP AVLAELVALA QEPSRPAPQP PVGQPPVGQP
SVVQPPAQEP TA
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