Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_3484 |
Symbol | |
ID | 8327674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 4049079 |
End bp | 4050230 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 644943984 |
Product | hypothetical protein |
Protein accession | YP_003101224 |
Protein GI | 256377564 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.442596 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATCGACG ACTCGTTCGC TGCGGCGGTG CGGGAGCTTG ACGCGTCCAG CCGGAGCGCC GTCGACGCGT TGCGCGCGGC GCTGACCGGT TCGGGTGGCG GTGGCGGTGG CACAGGAGGC CCGCCGCTGC CCGAGCGCGC CTCGTTCGAG GCGACCAACT GGGCCGCCTA CAGCCACGAG GAACTGCACC GGATGTTGCG GGAGCGGGCG GACATCGGGG TGGTCGGCGA GATCGCCGCC GAGTGGAAGC GGCACGCCGA GGCGTTGACC GGGCACGCCG ACGCGGTGCG GGGGCAGCGG GGTGCGCTCG CCGAGCACTG GCGGGGTGAC GTGGCCGAGC GGGCCGCCGA GCGGATCGGG GAGTTGGCCG AGTTGATCGG CGCCATCGGT GCGCGGGCTG GGCTGGTCGG GCGGGCGGCG CAGGAGTCCG CGGACGCGCT CGCCCTGGCC AAGCGCACCA TGCCCCCTCC GCCAGGGGGC ACCCCCTGGG ACGTTGCCGC TGGGGACGTT GCCGCGAGCA GCGGGGTGGT GTTCGCGGTT GGCGCGGTCG CCGCGGGTGG CACCAGCATG TTCGGCGCCG CCGCCATGGC CGGAGCCGGG CGGGCCCTGG CTGAGGAGGT GATGCGCGGC TACGAGGCGA GCCTGCACGG CAGCGACGCG CTCATCACGC CGCCCGTTCG CCCGACGACC ACGCTCGTGG GCGCCGATCG AGTCGCCGTG GAAGCCACCG GAGCCACCGG AGCTGCGGGA AGCAGCAGCC CAAGCGGCTG CGTCCCGGCC GGCCACGCGG GCACGACCGC CGCGTCTGCC GCGGTCGGCG TGCCGTGGTC CCGGCTGCTG CACGCCGACG TGCCCTCGCC GCACCCCGGA AGCGGCCCGG CGCCCACCGC GCCACCCGGT TCGGGCGCGG CGGCGGCACT GCGCGCCGTG ATCAACCAGC TCCTCGTCCC ACCCCGCCCG GTCGCCCAGC CCACGCCACC CGGCACCCCG CCCCTGCCCA CGCCGCCGCA GAGCACCGCG GGCGCCGAGG CCCGCACCCA CAAGCGGCGG CAGCCGGACG CCGCCACGGA TCTGTTCGAC GACGACCGGC CCGCCACCAG AGCTGTCATC GGGGACACCC GGTGGGACGC CGCCCAGGGG AGGCAGGCAT GA
|
Protein sequence | MIDDSFAAAV RELDASSRSA VDALRAALTG SGGGGGGTGG PPLPERASFE ATNWAAYSHE ELHRMLRERA DIGVVGEIAA EWKRHAEALT GHADAVRGQR GALAEHWRGD VAERAAERIG ELAELIGAIG ARAGLVGRAA QESADALALA KRTMPPPPGG TPWDVAAGDV AASSGVVFAV GAVAAGGTSM FGAAAMAGAG RALAEEVMRG YEASLHGSDA LITPPVRPTT TLVGADRVAV EATGATGAAG SSSPSGCVPA GHAGTTAASA AVGVPWSRLL HADVPSPHPG SGPAPTAPPG SGAAAALRAV INQLLVPPRP VAQPTPPGTP PLPTPPQSTA GAEARTHKRR QPDAATDLFD DDRPATRAVI GDTRWDAAQG RQA
|
| |