Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_3400 |
Symbol | |
ID | 8327590 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 3973462 |
End bp | 3974208 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | 644943904 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003101144 |
Protein GI | 256377484 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.160802 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCAACG AGCACGACCC GGCGCGGGTG CTGGCGCTGC TGTGGCGCAC CGACACGCGG CCCACCCGGC GCGGCGGGCC CGGTGTGGAC CGGATCGTGG CGGCGGCGGT GGCGCTGGCC GACGAGGACG GGCTGGCGGC GCTGTCGATG CGGCGGGTGG CCGAGGCGCT GGGCGTGGGC ACGATGTCGC TGTACACGCA CGTGCCGGGC AAGGCCGAGC TGGTGGAGGC GATGGTCGAC GCGGTGAGCG CGTCCACGCC GCGCGAGCCG GCGACCGGCG GGTGGCGCGA GCGGCTGGAG GCGGTGGCGC GGGACAACCG GGCGCTGCTG CTGCGGCACC CGTGGCTGCT GGACGCGCCG CTGCACCGGG CGGTGCTGGG GCCGGGGGCG ATCGGCAAGT ACGAGCACGA GCTGGGCGCG GTGGACGGCA TCGGCCTGGA CGAGGTCGAG ATGGACGCCG TGCTGACCCT GGTGCTGGGG CACGTGCGGG CGACCGCGCG CGCGGCGGTG GACGCGGAGC GCGCGCGGAC CGGGTCCGGC ATGGGGGACG AGCAGTGGTG GGCCAAGGCG GGCCCGGCGC TGGCTGCGGT GCTGGACGAG GAGCGCTACC CGCTGGCGGC GCGGGTGGGC GCCGCGGCCA GCGCCGCCCA CCGGGCCCCG CACGACGCCG AGCACGCGTT CGCCTTCGGG CTGCGGCGGG TGCTCGACGG CGTGGCCGCG CTGGTCAGTA GCCGCGCGAG GGCATGA
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Protein sequence | MSNEHDPARV LALLWRTDTR PTRRGGPGVD RIVAAAVALA DEDGLAALSM RRVAEALGVG TMSLYTHVPG KAELVEAMVD AVSASTPREP ATGGWRERLE AVARDNRALL LRHPWLLDAP LHRAVLGPGA IGKYEHELGA VDGIGLDEVE MDAVLTLVLG HVRATARAAV DAERARTGSG MGDEQWWAKA GPALAAVLDE ERYPLAARVG AAASAAHRAP HDAEHAFAFG LRRVLDGVAA LVSSRARA
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