Gene Amir_3399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3399 
Symbol 
ID8327589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp3973078 
End bp3973431 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content76% 
IMG OID644943903 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003101143 
Protein GI256377483 
COG category[K] Transcription 
COG ID[COG1725] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0501245 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCAGTC TCGACCCGGT CTCCCCCGTG CCGCCCTACG AGCAGGTGCG CTCCCAGTTC 
GCCCGCCAGA TCGCCGAGCG CGAGCTGGCG GTGGGAACCC GGCTGCCGAC GGTGCGCGCC
CTGGCCGCCG AGCTGGGCAT AGCGGTCAAC ACCGTGGCCC GCGCCTACCG GGAGCTGGAG
GAGGCCGGGC TGATCGAGAC CAGGGGGCGG GCGGGCACGG TGGTCAGCGC GGCGGGGGAG
CGCAGCCGGG AGCTGGTGCT GGGGGCGGCC CGGTCGTTCG CGGCCACCGC GCGCGAGCAG
GGGCTGACCG CGCAGGAGGC GCTGGAGATC GTCAGGGCGG CGCTGGCCGA CTGA
 
Protein sequence
MISLDPVSPV PPYEQVRSQF ARQIAERELA VGTRLPTVRA LAAELGIAVN TVARAYRELE 
EAGLIETRGR AGTVVSAAGE RSRELVLGAA RSFAATAREQ GLTAQEALEI VRAALAD