Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_3399 |
Symbol | |
ID | 8327589 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 3973078 |
End bp | 3973431 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 644943903 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_003101143 |
Protein GI | 256377483 |
COG category | [K] Transcription |
COG ID | [COG1725] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0501245 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATCAGTC TCGACCCGGT CTCCCCCGTG CCGCCCTACG AGCAGGTGCG CTCCCAGTTC GCCCGCCAGA TCGCCGAGCG CGAGCTGGCG GTGGGAACCC GGCTGCCGAC GGTGCGCGCC CTGGCCGCCG AGCTGGGCAT AGCGGTCAAC ACCGTGGCCC GCGCCTACCG GGAGCTGGAG GAGGCCGGGC TGATCGAGAC CAGGGGGCGG GCGGGCACGG TGGTCAGCGC GGCGGGGGAG CGCAGCCGGG AGCTGGTGCT GGGGGCGGCC CGGTCGTTCG CGGCCACCGC GCGCGAGCAG GGGCTGACCG CGCAGGAGGC GCTGGAGATC GTCAGGGCGG CGCTGGCCGA CTGA
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Protein sequence | MISLDPVSPV PPYEQVRSQF ARQIAERELA VGTRLPTVRA LAAELGIAVN TVARAYRELE EAGLIETRGR AGTVVSAAGE RSRELVLGAA RSFAATAREQ GLTAQEALEI VRAALAD
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