Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_3324 |
Symbol | |
ID | 8327514 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 3900346 |
End bp | 3901152 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 644943835 |
Product | transcriptional regulator, MarR family |
Protein accession | YP_003101075 |
Protein GI | 256377415 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2826] Transposase and inactivated derivatives, IS30 family |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0275415 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCCGGAG GCAGGCTCAC CCCGCAGGAA CGCCGGCAGA TCGCGCTGGG ACTGGCCGAC GACCTCCCGT ACGCGGAGAT CGCCCGGCGG CTGGACCGCC CCACCTCCAC CATCACCCGC GAGGTGACCC GCAACGGCGG GCCGGTCGCC TACCGCGCCG ACCTCGCGCA CCGCGCCACC GAGCAGCGCG CCCACCGGCG CAGGCAGGCC GCGCCGCGCG GGCGGCAGGC GCTCCCCCTG GCGCACGGGC GGGACGCGCG GGCCGTGGAC GAGTTCGAGG AGTCGCTGGC GGCGCTGTTC GCGCAGCAGG GGCTGCCGAG GATGACCGCG GGCGTGCTGG CCTGCCTGTA CGCCACCGAC ACCGGCTCGG TCACCGCGGC GGACTTGGTG GGGCGCTTGC GGGTGAGCCC GGCGTCGGTG TCGAAGGCGG TGGCGTTCCT GGAGGGGCAG GGGCTGATCC GCCGCGAGCG CGACGAGGGC CGCCGCGAGC GGTACGTCGT GGACCCGGAC GTCTGGTACC AGTCGATGAT CTCCAGCGCC CGCTCCAGCG CGGACATGGC GGTGATGTTC CGCTCGGGGG CCGCCGTGCT CAACCCCGGC ACGCCCGCGG CCGTGCGGCT GGAGAACATG GCGCGGTACG TGGACTTCGT CGCCGAGAGC CTGGCCGCCG CCGCCGAGCA GGCCCGCGCG ATGCCGCACG GCGGAGCGGA CGCGGCGGAG GCTCCGAAGC CGCCGGAGCC GGAATTGCCG GAGCCGGAAT CGTCAGAGCC GGAATTGTCA GGGGGCGCCG CTACCGTCGC GCCATGA
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Protein sequence | MPGGRLTPQE RRQIALGLAD DLPYAEIARR LDRPTSTITR EVTRNGGPVA YRADLAHRAT EQRAHRRRQA APRGRQALPL AHGRDARAVD EFEESLAALF AQQGLPRMTA GVLACLYATD TGSVTAADLV GRLRVSPASV SKAVAFLEGQ GLIRRERDEG RRERYVVDPD VWYQSMISSA RSSADMAVMF RSGAAVLNPG TPAAVRLENM ARYVDFVAES LAAAAEQARA MPHGGADAAE APKPPEPELP EPESSEPELS GGAATVAP
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