Gene Amir_3135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3135 
Symbol 
ID8327325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp3623108 
End bp3623974 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content78% 
IMG OID644943653 
Product6-phosphogluconate dehydrogenase NAD-binding 
Protein accessionYP_003100893 
Protein GI256377233 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTTGTCG TGACCGGGGC TGATGTGGTG GTCGTCGGGT GCGGGTTGAT GGGGTCCGCG 
ATGGTGCGGG CGTTCGCGGG CGCGGGGCGT TCGGTGGCGG CGTGGAACCG GACGCCCGAG
CGGGCGCTCG CGCTCGCGGG GGAGCGGGTG GCGGCGGTGC GGGACGTGGC CGGGGCGGTG
GCGCCTCTGG TGGTGGCCTG CACGTCGACC TGCGAGGCCG CGCTGGAGGC GCTGGACCCG
GTGCGGGACT GGCGGGGGCG GACGCTGGTC ACCCTGCCCA GCGGCACGCC CGCCGACGCC
GAGGCGGCGC GCGACTGGGT CGTCGACCGG GGCGGGGAGC ACCTGGACGG GGTGATCCTG
TGCTACCCGC AGGAGATCGG CTCACCCGAC GCGGTGATCC TCTACGCGGG CCCGTCCGGG
ACGTGGGCCG CGCACGGCCC GGTGCTGGGC GCGCTCGCGG GGGCGTCGCG GCACGTCGCC
GAGGAGGTCG GGACGGCCAA GCTGCTGGAC GCCGGGCTGA CCGGCGCGTT CTACGTCAGC
GCGCTCGTGG CGTACGCGGA GGCCGCCGGG CACCTGATCG ACCGGGGGAC GCCCCCGGAC
GTGCTGCGCG CGCTGACCGG GGTCGCGCTC GAGATCCTGC GCCACGCGAC GGACGAGGTC
GTCACGGCGC TCGTGACCGA CGAGCACACC ACGGACCAGG CCACGATCAC CACCTTCGCC
GAGGGCGCCC GCGCCGCGCT GACCGCCGTG CGCGCCACCG GAAGCCCGGC CCACCTGCTG
ACCGCCGCCC TGCACCGCCT GGACACCGCC GTCGCCGCGG GCTCGGGCTC CCTGGCCGTC
TCCGCCCTCG GCCTGCCTCC CCGCTGA
 
Protein sequence
MVVVTGADVV VVGCGLMGSA MVRAFAGAGR SVAAWNRTPE RALALAGERV AAVRDVAGAV 
APLVVACTST CEAALEALDP VRDWRGRTLV TLPSGTPADA EAARDWVVDR GGEHLDGVIL
CYPQEIGSPD AVILYAGPSG TWAAHGPVLG ALAGASRHVA EEVGTAKLLD AGLTGAFYVS
ALVAYAEAAG HLIDRGTPPD VLRALTGVAL EILRHATDEV VTALVTDEHT TDQATITTFA
EGARAALTAV RATGSPAHLL TAALHRLDTA VAAGSGSLAV SALGLPPR