| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3028 |
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| Symbol | |
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| ID | 8327218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 3501226 |
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| End bp | 3502983 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644943553 |
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| Product | avirulence protein |
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| Protein accession | YP_003100793 |
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| Protein GI | 256377133 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.577081 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGGCA GATCAGGACG GCGGAGGCCG CTGCGCGCTT GGGTGACGGC CCTGGTCGTC
GGCGTGCTCG CGGCGGGGCT CGTGCAGCCC ACCGCGGCGA GCGCGGCGGC CAAGAGCGTC
TACATCCCGG CGCGCTGGAC CCAGACCGGA GAGGTCCCCT GGGCGCAGGA GCGGACCCGC
GAGTCCGCGA ACTTCATCCT GCTGTGGGGC GAGAAGTCCG GCGCCAACCC GGTGGCGGCG
CCCTCCCCCT ACAACTTCGA CCCGAACAGC GTCATCACCC AGCTGGAGAA CCTCTACAGC
TTCTACGTGA ACACGATGAA GTTCACGCCG GAGACGGGGC TGCTCGCCCA GCACAAGATC
ATCGTGATCG TCACCCGGAC CTGGAACCGG ACCGCGCTGG ACGCCTGGGC GACCGGCGGC
TCCACCGACG GCCGGGTCGG CGTGATCAAC GTGGCGCCCG GCGCGGCGCT GCCCGGCTCG
TGGGGCCTCG CGCACGAGCT GGCGCACGTC TTCCAGAACT ACACCTTCCT GGGCCGCTCC
GGGGTGGGCT TCACCGCGCC GTACTCGGGC ACGTTCTGGG AGACCAGCGC GGAGTTCATG
GCCATGCAGG CGCTGCCGAC CACGGCCGCG GGCGACCTGA CCCGCTGGCT GCGCTCGGAG
AACCTGTACT GGAGCTCCAG CCGCCACCAC TACGGCAACT GGATGCTGAT GCAGTACATC
AAGGACCGCG ACGGTCTTCC GATGTTCAAC CGCATCTGGA ACGAGGCCAC CAGCTCCGAG
CACCCGCTGG ACACCTACCG GCGCATCGCC GGGATCACCC AGGCCGAGCT GAACAGGCGG
ATCGGCGAGT ACGCGACCCG CAACGTCACG TGGGACTTCG GCAACCGCTC GACGCTGATG
CCCTTCATCG ACAACGTGTA CGGCTCCGGG TTCCTCAAGG CGTACAACGG CGGTCTGGTC
GAGGCGGTGG ACGCGGGCGC CGGGCACTTC CGGATGAACA CCCGCACCGC GCCGTCCGAC
TACGGCTTCA ACAAGATCAA GATGGTGCCG ACCACCAACG GCGGCCTGGT GAAGGTGCGC
GTCAAGGGGC ACACCGAGAC CGGTGCCGCG GGCTGGGCGT TCGGCATGGT GGCGCTGCGC
AACGGCGGCA GCCCGCGCTA CTCGCCGGTG ACCGTGGCCA CCGACGGGCA GATCGACTTC
CAGCTCCAGT CCGGGGAGAA CGAGGTCTAC CTGGTCGTCA CCGGCACGCC GAACTCGGTG
CCGCGCTACG CGTTCCTCGA CGGCTACAAC GCCGCGAAGC GCTACCCGTA CGAGTTCCGG
GTCTCCGGCG CGACGCCGTC CGGGTTCGAG CCGAACCACG TCAAGCCCGC GGCGACCAGT
GGTGGACGCT GGCACAGCAA CGGCGGTGGT TGGGTCGCGA ACACCGCGAA CGTGGCCGCG
AGCGCGTACG TCGGCCCCAA GGCCGCCGTC ATGGGCCGCG CCTCGGTGCA GGGCAACGCG
CGCGTCGAGG GCCTGGGCTG GGTCAACGGC GGCACGGTCG GCGGCAACGC GGTCGTGCGG
GACAACGCGC TGATCCAGGA CGGGGCGAAC CTGTCGGGCA ACGTCGTGGT CGGCGGCGAC
GCCGAGTTCG CGATCGCCTG CTCGTCCGGC ACGTACCTGG CGTTCAACCC CGACCGGGGT
TGCGACGGCA GGGCTGGGGA GACCGACGTC AACCCGGCGC ACGGCACGTT CCCGACCTCG
GACCTGGCGC TGCGCTAG
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| Protein sequence | MIGRSGRRRP LRAWVTALVV GVLAAGLVQP TAASAAAKSV YIPARWTQTG EVPWAQERTR
ESANFILLWG EKSGANPVAA PSPYNFDPNS VITQLENLYS FYVNTMKFTP ETGLLAQHKI
IVIVTRTWNR TALDAWATGG STDGRVGVIN VAPGAALPGS WGLAHELAHV FQNYTFLGRS
GVGFTAPYSG TFWETSAEFM AMQALPTTAA GDLTRWLRSE NLYWSSSRHH YGNWMLMQYI
KDRDGLPMFN RIWNEATSSE HPLDTYRRIA GITQAELNRR IGEYATRNVT WDFGNRSTLM
PFIDNVYGSG FLKAYNGGLV EAVDAGAGHF RMNTRTAPSD YGFNKIKMVP TTNGGLVKVR
VKGHTETGAA GWAFGMVALR NGGSPRYSPV TVATDGQIDF QLQSGENEVY LVVTGTPNSV
PRYAFLDGYN AAKRYPYEFR VSGATPSGFE PNHVKPAATS GGRWHSNGGG WVANTANVAA
SAYVGPKAAV MGRASVQGNA RVEGLGWVNG GTVGGNAVVR DNALIQDGAN LSGNVVVGGD
AEFAIACSSG TYLAFNPDRG CDGRAGETDV NPAHGTFPTS DLALR
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