| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3000 |
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| Symbol | |
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| ID | 8327190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 3466536 |
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| End bp | 3467354 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 644943526 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_003100766 |
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| Protein GI | 256377106 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0641388 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGACA CCGAGGTGGT CGTCGTCATC GGGACGGGTG GCATGGGGCG GGCCATCGCC
CACCGCCAGG GCGCGGGCAG GCACGTGCTG CTCGCGGACT TCGACGAGGC CACGCTGACG
TCCGCCGCCG ACTCGCTGCG CGGCGAGGGG CACGTGGTGA CCGCCCAGCG GGTCGACGTG
TCGGACGCGG GGTCCGTGCG CGCGCTGGCC GACGCCGCCG CCGCGCTGGG GCGGGTCGCG
CAGGTCGCGC ACACCGCCGG GCTCTCCCCC GCGCAGGCCC CGGTGCAGGC GATCCTCGCC
GTCGACCTGC TCGGCGTGGA ACTGGTGCTG GCGGAGTTCG GCCGGGTCGT CGCGCCGGGC
GGGGCGGGTG TGGTGATCGC CAGCATGGGC GGGCACCTGA CTCCGATCAC CCCGGAGCTG
GAGCGGCTGC TGGCGAGCAG GACCGCAGCC GAGCTGATCG CCTCGCCCGA GCTGGACCCG
GCGGCGCTGA ACCCCGGTGG CGCGTACGGG ATCGCCAAGC GCGCCAACCA CTTCCAGGTC
CAAGCCGCCT CACGCGCGTG GGGCGAGCGC GGCGCGCGGG TCAACTCGAT CAGCCCCGGC
GTGATCGCGA CCCCCATGGG TCAGCAGGAG CTGGCGAGCG CGAGCGGCGA GCGGATGCGG
GCGATGGTGG CCGCGTCCGG CACCGGGCGG GTCGGCACGG CGAGCGACAT CGCCGAGGCC
GCCGCGTTCC TGCTCGGGCC CGGTTCCTCG TTCGTCACCG GCGCGGACCT GCTGGTGGAC
GGCGGTGTCG TGGCCGCCGT GCGCGCCGGG CGGGGCTGA
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| Protein sequence | MRDTEVVVVI GTGGMGRAIA HRQGAGRHVL LADFDEATLT SAADSLRGEG HVVTAQRVDV
SDAGSVRALA DAAAALGRVA QVAHTAGLSP AQAPVQAILA VDLLGVELVL AEFGRVVAPG
GAGVVIASMG GHLTPITPEL ERLLASRTAA ELIASPELDP AALNPGGAYG IAKRANHFQV
QAASRAWGER GARVNSISPG VIATPMGQQE LASASGERMR AMVAASGTGR VGTASDIAEA
AAFLLGPGSS FVTGADLLVD GGVVAAVRAG RG
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