| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2888 |
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| Symbol | |
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| ID | 8327077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 3331030 |
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| End bp | 3332478 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644943420 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003100661 |
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| Protein GI | 256377001 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.293011 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCAGCG CACGCCCGCA CACGCCAGCA GCACCCCCGG CACCGCCGGG GGCGAACACC
GTCGTCTGGG TGCTGGCCTT CACCGGGATC GTCGTCTCGC TCATGCAGAC GGTCGTGATC
CCCCTGGTCC CGCAGTTCCC GAAGCTGCTG AACGCCGACC CCGCCGACAC CGCGTGGGCG
ATCACCGCGA CCCTGCTGGC CGCCGCCGTC GCCACCCCGA CCGTGGGCCG CCTCGGCGAC
ATGCACGGCA AGCGCCGGAT GCTGCTGATC AGCATCGTGC TGCTGGTCGC CGGCTCGGTC
GTGGGCGCGC TCAGCGACAC CCTCGGCCCG ATGATCGTCG GCCGGGTGCT CCAGGGCCTG
GCGTCGGGCG TGATCCCGCT GGGCATCAGC ATCATGCGCG ACGAGCTGCC CGCCGAGAAG
CTCGGTTCGG CGACCGCGCT GATGAGCGCC TCGCTCGGCG TCGGAGGCGC GCTGGGCTTG
CCGCTGGCCG CGGTGCTGGT GGAGCAGCTG GACTGGCACG TGCTGTTCTG GGGCGCCGCC
GGGCTGGGCG TGATCGCCGG GGTGCTCGTG GTGGCGCTGG TCCCGGAGTC GGCGGTGCGC
TCGGGCGGCC GGTTCGACCT GGTGGGCGCG CTCGGGCTGT CGGTGGTGCT GGTGTGCCTG
CTGCTCGCGG TGTCCAAGGG CGCGCAGTGG GGCTGGGGCA GCGCGCTGAC GCTGGGTCTG
CTCGGCGGCG CGGTCGTCGC GCTGGCCGCG TGGAGCTGGT GGGAGCTGCG CACCGCCGAA
CCGCTGGTGG ACCTGCGCAC CAGCGCGAAT CCCCAGCTCC TGCTGACCAA CGCCGCCTCG
GTGGTCTTCG GGTTCGCGAT GTTCGCGATG TCCCTGGTGA TGCCGCAGCT GCTGCAGCTG
CCCGCGTCCA CCGGGTACGG CCTCGGCCAG TCGCTGCTCG GCGTCGGCCT GGTGCTGGCC
CCGTCCGGAC TGGTCATGAT GGCCATGGCG CCGCTGTCCG CGCGGCTGTC GCGGGAGCGC
GGCCCCAAGA TCACCCTGAT CACCGGCGCG CTCGTGGTCG CGGTCGGCTA CGGGCTCAAC
GTGGCGCTGA TGAGCCAGCT CTGGCACCTG GTGCTGGTGT CGAGCATCAT CGGCGCGGGC
ATCGGCCTGT CCTACGGCGC GCTGCCCGCA CTGGTGATGT CGGCGGTCCC GGTGTCGGAG
ACCGCGGCGG CGAACAGCCT CAACACCCTG ATGCGCTCGA TCGGCACGTC GCTGTCCAGC
GCCGTCGCGG GCGTGATCCT GACCCAGCTG ACCACGGCGG CGGGCCTGCC CTCGCAGCAG
GCGTTCCAGG TGATCATGGC CGTGGGCGCG GGCGCCGCGC TGACCGCCGC AGGCGTGGCC
GCGCTGCTCC CCGGCACCGG CCGCGTGGTC GTGACGCAAC CGGCCACGGC AGCCACCGCG
ACCCGCTGA
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| Protein sequence | MSSARPHTPA APPAPPGANT VVWVLAFTGI VVSLMQTVVI PLVPQFPKLL NADPADTAWA
ITATLLAAAV ATPTVGRLGD MHGKRRMLLI SIVLLVAGSV VGALSDTLGP MIVGRVLQGL
ASGVIPLGIS IMRDELPAEK LGSATALMSA SLGVGGALGL PLAAVLVEQL DWHVLFWGAA
GLGVIAGVLV VALVPESAVR SGGRFDLVGA LGLSVVLVCL LLAVSKGAQW GWGSALTLGL
LGGAVVALAA WSWWELRTAE PLVDLRTSAN PQLLLTNAAS VVFGFAMFAM SLVMPQLLQL
PASTGYGLGQ SLLGVGLVLA PSGLVMMAMA PLSARLSRER GPKITLITGA LVVAVGYGLN
VALMSQLWHL VLVSSIIGAG IGLSYGALPA LVMSAVPVSE TAAANSLNTL MRSIGTSLSS
AVAGVILTQL TTAAGLPSQQ AFQVIMAVGA GAALTAAGVA ALLPGTGRVV VTQPATAATA
TR
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