| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2764 |
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| Symbol | |
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| ID | 8326953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 3184580 |
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| End bp | 3186631 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644943302 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_003100543 |
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| Protein GI | 256376883 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0762539 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCGCAA GACACCTGTG GGTCCGAGCG GACCGAGCCG CCGACCGCGC CGCGCACGTG
GCCGCGCTGG ACCTGCCCCC GCTGCTGGCG CGCGTGGACG CCCACCGCAA CCTGCGCGGC
CCGTACTCGG CGGCGGGCGC CCTGCTCCGC GCGCTCGCCC CCGACGTCCT CGCCGACCAC
CCGGACCTGG CCGCCCGCCA CAACATCGAG GTCGCGACGG TCGCCCCCGA GCTGGCCGCG
CTGGTCCCGT CGCCGTGGTC GAGCATGGAG TGGACGGTGA GCACCGAGGA GCGCACCCGC
TTCTACTCCC GCCTGCACAC CCTGAACATC GCCAACGGCC TGGCCGACCT CCTGCGCGCG
ACCCTGACCG CCCCCGCCAC CCTGGTGGTC GACAACGCCC ACCACGCCGA CCCGACCGAC
CAGGAGTTCG TCGCGGTCCT CCTGCGCAGG ACCGACCTGC CGAACCTGCA CGTGGTCGTC
TGCACCGCAA CCACCCCCCT GGAGGACCCG AAGGGCGAAC TCTCCCTGTC CCTCAAGGAG
GTCCTCCCCG CGCACGCCAC CCCCCTCACC GCCCCCGCCC TCCCGGACCC GCCCTACCGG
TCCTACGTGG ACAGCGACGG CGCCGAAGAC GACCCGCGTT CCCTGGCCGA CTACCACGCC
CTCCCGCCCG CCGAACGCGC CGCCCTGCAC GACGCCCGCA GGGCGGAACT GGCGGCGAGG
TCGGAAAAAT CCCTGGAGCT GGGCGCGATC CCGTTCCACG CCGAACGCGG CAGCGACCAG
GAGAGGCGCA CCGCCACCCT CCTCACCGCG ATGGACCACT GCCGCAAGGT GGGCCTGTAC
CAGGCGGCGG TGGACTTCGG CGTCAGGGGC CGGGCCGCCG TGGACCGCGA GTCGGACCCG
AAGCTGTGGT GGCACTTCAC CGAGGGCGCG AGCACCGCGA TGGCCTCGGT CGGCCGGGCC
GAGGAGGCCG AGGAGATCTA CCACGAGGCC AGGGCCGCCT CGGCGGACCC GGTGGTGCAC
ATGAACCTGG CCTACGGCAG CGCCATGCTG TACGCCAGGC ACTTCCCCGC CGAGCGCAGG
GACTTCCAAC GCGCCCGAGG CTGGATGAAC CTCTCGATAG CCCTGGCCGA CCAGCTGGGC
GACCCGAAGG AACGAGCGTT CCACTCCGTC TTCAGCCGCA ACGGCCTGGC CCTCGTCGAA
GTCCGCCAAG GCAGACCGGC GGAAGCCCTG CGCCTCCTGG AGGAGGGCAT GGCCAGGTTG
GACGCCGACC TGGCCCCTGG CGAACACCCC CTGCACCGCT CGGTGCTGCG CTACAACCGG
GCCCAGGTCA ACGCCATGAC CGGCAAGGTG GAGGAGGCCC TGGCCGACTA CCAGGCCGTG
GCCGCCCTGG ACCCGGACTT CCCGGAGCAC CACTTCCACG TGGCCAGTAT GCTGCGCAAG
CTGGGCAGGG ACGAGGAGGC CCTGGAGGCG TTCGAACGCG TCCTCCCCCT CTCCCCGCCG
TTCCCGGAAG TCCACTACAA CCTGGGCGAC ACCAGGCTCG CCCTGGGCGA CGCGGAAGGC
GCGCTGGCCG AGTTCACCAA GGTCCTGGAG CTGGACCCGG CCCACCAGGA GGCCAGACTC
AGCCGAGCGG AACTCCGCTG CGACCTGGGC GACCACGCAG GCGCCCTGGC AGACGTCGAG
GCCGGCCTGG CACTGTCCCC CGACAACCCC ATGCTCCGCT GCGTCCAGGC AACCGCCCTG
GCCGACGCAG GCGCCCCCGA CCAGGCCCGA ACCCTGATCG AGTCCCTGAC CACCACCCAC
CCCACCTGCG CCCAGGCGTG GGCGATCCGC GCAAGACTGG AGTACGAGTC CGGCGAACTC
CCCCAGGCCC TGGCCGACTT CGACGAGTCC GTCCGCCTGC TGGACGCCCC GGAGGTGAGG
TACAACCGAG CCCTGGTCCT GGAAGAAACC GGCGACTACA CGAGAGCCGC CCAGGACTAC
CGCGAGGTCC TGGCCAGAAC CGAGGACGAG GACGCCCGCG ACCGACTGGC CCACTGCCTG
AGCCTGACCT GA
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| Protein sequence | MTARHLWVRA DRAADRAAHV AALDLPPLLA RVDAHRNLRG PYSAAGALLR ALAPDVLADH
PDLAARHNIE VATVAPELAA LVPSPWSSME WTVSTEERTR FYSRLHTLNI ANGLADLLRA
TLTAPATLVV DNAHHADPTD QEFVAVLLRR TDLPNLHVVV CTATTPLEDP KGELSLSLKE
VLPAHATPLT APALPDPPYR SYVDSDGAED DPRSLADYHA LPPAERAALH DARRAELAAR
SEKSLELGAI PFHAERGSDQ ERRTATLLTA MDHCRKVGLY QAAVDFGVRG RAAVDRESDP
KLWWHFTEGA STAMASVGRA EEAEEIYHEA RAASADPVVH MNLAYGSAML YARHFPAERR
DFQRARGWMN LSIALADQLG DPKERAFHSV FSRNGLALVE VRQGRPAEAL RLLEEGMARL
DADLAPGEHP LHRSVLRYNR AQVNAMTGKV EEALADYQAV AALDPDFPEH HFHVASMLRK
LGRDEEALEA FERVLPLSPP FPEVHYNLGD TRLALGDAEG ALAEFTKVLE LDPAHQEARL
SRAELRCDLG DHAGALADVE AGLALSPDNP MLRCVQATAL ADAGAPDQAR TLIESLTTTH
PTCAQAWAIR ARLEYESGEL PQALADFDES VRLLDAPEVR YNRALVLEET GDYTRAAQDY
REVLARTEDE DARDRLAHCL SLT
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