Gene Amir_2624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2624 
Symbol 
ID8326813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp2956295 
End bp2956975 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content75% 
IMG OID644943164 
Productisochorismatase hydrolase 
Protein accessionYP_003100405 
Protein GI256376745 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.722886 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCACCC GCGAGGAGAT GCTCGTCCAC CTGACGGCGC CGGAGAGGCG TCCGGCGCTG 
CTCGTGGTGG ACGTGCAGAA CTCCTTCGCC GACCCGGAGC TCCTCGCCTC GTGGGGGACT 
CCCCCCGAGG CGCTGGAGCT GGTGGCGAGC GCCGTGGCGG GCACCGACCG GTTGGTCGGG 
CTCGCCCGCG CCGCGGGCGT CCCGGTCATC TGGATCGAGC TCGCCAGCGA CCCGGCCCGC 
CCCTGGCGGG CCAGCGCCTG GCTGCGCACC GGCGACCCGG ACACCCCATA CGGGCCGGAC 
GAGCCGTGCG TGGCCGGGAC GGAGGGCGCG CGCTGGTACG GCGTCGAGCC CGGCGCCGGG 
GAGGCCAGGG TCGCCAAGCG CGGCTACAGC GGCTTCCACG GCACCGGGCT CGCCGACCTG 
CTGCACGAGC AGGGGATCGA CTGGGTGACC GTCGCGGGAC TGACCACGGA GTGCTGCGTG 
GCCGCCACCG CGGTGGACGC CTTCCAGCAC GGATATCCGG TCGTGGTGGC CACCGACGCG 
GTGGCCGCGT ACGACCTCGA CGTTCAGCGC GCCGCGCTGA ACCAGCTCGA ACTGACCTCG 
GCCGTGCTCG CCAGCTCCGC CGATCTGCAA CGGACGTGGG CGTCCTGGGG CGCCGCACGA 
CTGACGGGAG CACTTCGGTG A
 
Protein sequence
MPTREEMLVH LTAPERRPAL LVVDVQNSFA DPELLASWGT PPEALELVAS AVAGTDRLVG 
LARAAGVPVI WIELASDPAR PWRASAWLRT GDPDTPYGPD EPCVAGTEGA RWYGVEPGAG 
EARVAKRGYS GFHGTGLADL LHEQGIDWVT VAGLTTECCV AATAVDAFQH GYPVVVATDA 
VAAYDLDVQR AALNQLELTS AVLASSADLQ RTWASWGAAR LTGALR