| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2485 |
|---|
| Symbol | |
|---|
| ID | 8326674 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 2770371 |
|---|
| End bp | 2771597 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644943030 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003100271 |
|---|
| Protein GI | 256376611 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000045173 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGGCAGTG GCAGTGGCAG TGGCATCGGC AGTAACAGCA GCGGCGCGGC GGGCCGGGTG
GCGGCGCTGG TCGTCGGGGT GGCGATCATC GTCGTGCTGG CGGTGGTCGT CGTCGGGCAG
AACGGCGGTG ACAGCTCAGC GCGCAGCGGT GACGACGGGG CGGGCTGCAC GGCCGACGTC
GTGCGGGTCA AAGGGCTGAT CGGCTCCGAG AAGCAGTCCT ACTTCGACGA CCCTGACGTG
CGAACCCGTT TGCGCTGCCT CGGTTTCGAG GTGGCGGTGA GCCCGGCCGG GTCGCGCGAG
GACATGCTGG TGCAGCTGGA GCAGGACCCG GAGCACGCGT TCGCGTTCCC GTCCAGCACC
GCGACCGCCG AGAAGATCAA ATCCGAGACC GGGGCCAAGA CCGGGATCGC GCTGTTCTCC
TCCCCGATGG TCGTCGTGAC GCACCGACCG CTGGTGGAGG TGCTCACCCG CGCTGGGATC
GTGCGGCAGG ACGGCGGCAG CGGTGGCAGC GGCGGCGGCG ACGACAGCGA CAGCGACGGC
AGCGGCGGCG GCGGCGGTGA ACAGCTGGTG GACGTCGAGG CGCTGCTCGG CGCGGCCCGC
GACGGCCTCA AGTGGAACCA GCTCCCCGGA AACCCCAGCG GTCCCAACAA GGTCGTGTCG
CTGAGCACGA CCGACCCCAA GGACTCCAAC TCCGCGATCA TGATGCTGTC GATCGCCTCG
CACGCGGCGA ACGGCGGCGC GGTGGTCACC AGCGACGCGG AGATCGCGCG GGTCATGCCG
GACCTGTGCT CGATGGTGCT CCAGCAGGGC CAGCAGTCGC CGACCAGCGA GGTGCTGTTC
AACGACTACC TGCGCGACCC GCAGGGCGGG CGGATCCAAC TGGGGCTGGT GTACGAGGCG
CAGTTCCGCT CGACCAAGCC CGCGCCCGCG CTGCCCGAGG ACGCCGTGGC GCTGTTCCCG
AACCCGACGG TGTACTCGCG GCACACGTTC ATCCCGCTGG AGGGCGAGGA CGACGCGAGG
CGGCTCGGGG AGGCGCTGGG CGGTGACGAC CGGTTGATCG AGCTGGCCGC GGCGCACGGG
TTCCGGCCGG AGCGGGCGTC GGCGCAGCCG AGCGGGGCTC CCGAGGCGCC GAGGTTCGTG
GTGGAGGCGC CGTCGGCGGG GGTGTTGGAG CGGATGCTCG ACGGGTTGGC GGAGATCCAG
CGGAGCGGCA GGGGGTGCGG GCGGTGA
|
|---|
| Protein sequence | MGSGSGSGIG SNSSGAAGRV AALVVGVAII VVLAVVVVGQ NGGDSSARSG DDGAGCTADV
VRVKGLIGSE KQSYFDDPDV RTRLRCLGFE VAVSPAGSRE DMLVQLEQDP EHAFAFPSST
ATAEKIKSET GAKTGIALFS SPMVVVTHRP LVEVLTRAGI VRQDGGSGGS GGGDDSDSDG
SGGGGGEQLV DVEALLGAAR DGLKWNQLPG NPSGPNKVVS LSTTDPKDSN SAIMMLSIAS
HAANGGAVVT SDAEIARVMP DLCSMVLQQG QQSPTSEVLF NDYLRDPQGG RIQLGLVYEA
QFRSTKPAPA LPEDAVALFP NPTVYSRHTF IPLEGEDDAR RLGEALGGDD RLIELAAAHG
FRPERASAQP SGAPEAPRFV VEAPSAGVLE RMLDGLAEIQ RSGRGCGR
|
|---|
| |