Gene Amir_2359 details

Gene Information

• Locus tag: Amir_2359
• ID: 8326548
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: +
• Start bp: 2615051
• End bp: 2615563
• Gene Length: 513 bp
• Protein Length: 170 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 644942904
• Product: protein of unknown function DUF180
• Protein accession: YP_003100145
• Protein GI: 256376485
• COG category: [S] Function unknown
• COG ID: [COG1699] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGCCG TCCTGGAGAG GGGAGCGAGG ACCACGAGCA CCACAGTGGA CGAACAGCTG 
CCGACCATCG AGTTCGTCAC GCCGCTTCCA GGGTTCCCGC AGCACCGGAC CTTCGTGCTG 
GTGTCGCTGC ACGAGGAGGG GCTGCTCTAC GCCCTGCGCT CGGCGGACGA CCCCGGCCTC 
AGGTTCCTGG TCGTCCCGCC CGCCCCGTTC TTCCCGGACT ACGCGCCGGT CGTGGGCGAG 
GAGGCGCTGG ACCAGCTGGG CACCCGCGAG GCGGACAACC TGCTGCCGCT GCTGGTGGTG 
ACCGTGGGTG ACAAGGCGGC CGGTGCGACG GCGAACCTGC TGGCGCCGAT CGTGGTGGAC 
CAGCGGAGCA GGCGTGCGGT CCAGGTCGTC CAGGCGGATG ATCTGCCCAC GCGCGCACCG 
CTGGCGCGTG ACGTGCCGGC CCCCAACGCG GGAGGAAGAC CGCAGAATGC TAGTGCTGAC 
GCGACGGGCG GGGGAGAGCT TGCGGATCGG TGA 

 

Protein sequence

MTAVLERGAR TTSTTVDEQL PTIEFVTPLP GFPQHRTFVL VSLHEEGLLY ALRSADDPGL 
RFLVVPPAPF FPDYAPVVGE EALDQLGTRE ADNLLPLLVV TVGDKAAGAT ANLLAPIVVD 
QRSRRAVQVV QADDLPTRAP LARDVPAPNA GGRPQNASAD ATGGGELADR