Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_2306 |
Symbol | |
ID | 8326495 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 2563846 |
End bp | 2564202 |
Gene Length | 357 bp |
Protein Length | 118 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644942851 |
Product | anti-sigma-factor antagonist |
Protein accession | YP_003100092 |
Protein GI | 256376432 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00064789 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGAGACC TCGACGAGGA GATGAGCGTC CACTCGCAGG AGTGCGGCGG CGCGGTGGTG CTCCACGTCA GCGGCGAGAT CGACCAGCTC ACGGTCGAAC CGCTGCACCG CGAGCTCCTG TCCGCGCTGG CCCGCGTGCG CCCGCCGGAA CCGGTGGTGG TCGACCTGAC CGAGGTCGGG TTCTTCGGCT CGGCCGGGCT GAACGAGCTG GTCACCGGGC ACCTGCAGGC CGAGCTGCTC GGCACCCGGC TGTCCGTGGT CGCCGGGCAC CGCGAGGTGC TGCGTCCGCT CGCGATCAGC GGGCTGGACG AGCAGCTGGA CGTGCACCCG ACCCTCCAGG CTGCGCTCGG CGCCTGA
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Protein sequence | MRDLDEEMSV HSQECGGAVV LHVSGEIDQL TVEPLHRELL SALARVRPPE PVVVDLTEVG FFGSAGLNEL VTGHLQAELL GTRLSVVAGH REVLRPLAIS GLDEQLDVHP TLQAALGA
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