Gene Amir_2306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2306 
Symbol 
ID8326495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp2563846 
End bp2564202 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content73% 
IMG OID644942851 
Productanti-sigma-factor antagonist 
Protein accessionYP_003100092 
Protein GI256376432 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00064789 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGAGACC TCGACGAGGA GATGAGCGTC CACTCGCAGG AGTGCGGCGG CGCGGTGGTG 
CTCCACGTCA GCGGCGAGAT CGACCAGCTC ACGGTCGAAC CGCTGCACCG CGAGCTCCTG
TCCGCGCTGG CCCGCGTGCG CCCGCCGGAA CCGGTGGTGG TCGACCTGAC CGAGGTCGGG
TTCTTCGGCT CGGCCGGGCT GAACGAGCTG GTCACCGGGC ACCTGCAGGC CGAGCTGCTC
GGCACCCGGC TGTCCGTGGT CGCCGGGCAC CGCGAGGTGC TGCGTCCGCT CGCGATCAGC
GGGCTGGACG AGCAGCTGGA CGTGCACCCG ACCCTCCAGG CTGCGCTCGG CGCCTGA
 
Protein sequence
MRDLDEEMSV HSQECGGAVV LHVSGEIDQL TVEPLHRELL SALARVRPPE PVVVDLTEVG 
FFGSAGLNEL VTGHLQAELL GTRLSVVAGH REVLRPLAIS GLDEQLDVHP TLQAALGA