Gene Amir_2162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2162 
Symbol 
ID8326351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp2386743 
End bp2387789 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content76% 
IMG OID644942712 
Productvirulence factor Mce family protein 
Protein accessionYP_003099953 
Protein GI256376293 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID[TIGR00996] virulence factor Mce family protein 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGGGTCA GGATCGCGCT GTTCGTGGTG ATCGCCCTGG TGGGCACCGG GTTCACCGGC 
GCCCGCTACG CCGGGCTCGT GCCGGGCGAC GAGTACCCCG TGCACGTGCG ACTGGCCAGG 
ACCGGCGGGC TGTTCGCGGG CGGCGAGGTC ACCCACCGGG GGGTCCGGGT CGGGCGGGTC 
GACCGGGTCC GGCTGGTCGA CGGGGTCGTG CAGGCCGACC TGCTGATCGA CGGCGGCGTC 
GCGATCCCGC GCGCCGCGCG GGCGGTGGTG ACCAACCGGT CCGCCGTCGG CGAGCAGTAC 
CTGGACTTCA AGCCCGGCGA CGGGGAGGGG AGCGGGGACC TCGCCGGGGA CCTCGCCGTG 
GGCGAGGTCG TGCCGATCGG GCGGACCGCG CTGCCACCAC CGGTGGAGGG CGTGCTCACC 
GAGCTGGACG ACCTGGCCAG GTCCGTGCCG CAGGACGCGC TGCGCACCGT CGTGGACGAG 
CTGGACCTCG CGCTCCGCGA CACCGGACCG GACCTCGGGC TGCTGCTCGA CAGCGTCCGC 
GACCTCACCG CCACCGCGGG CGAGCACCTG CCGCGGACCA GCGCCCTGCT GCGCGACGCC 
GGGATTGTGC TGGACACCCA GCTCGACCAG GCCGCCGCCA TCACCTCGTT CGCCGGGTCC 
GCCGCCCAGG TCGCCGCCGC CCTGGAGCGC GGTGACGCCG ACCTGCGGCG GGTGATCGAG 
GCCGGGCCCG GCGTCGGCGA GGAGGTCGGC GGGCTGCTCC GGGAGAGCGG CGGCGGGCTC 
GGCGCCACCC TGGCGAACCT CGTCACCACC GCCGACGTGC TGCTGCGCAG GCAGGGCGAG 
CTGGAGCAGG TGCTGGTGTC CCTGCCGCGC GCCGTCGAGG TCGGGCAGTC GGTGTACTCC 
GGCGGCGGCG TCTCCCTCGG ACTGGCGCTC ACCTTCTTCG AGCCGCCGCC GTGCACCCAG 
GGCTACGAGG CGACCGCGCG GCGTGGCGCG CTCGACACCG GACCGGCCGC GTTCAACGCG 
GGCGCCGCCT GCACCCTGCC CAGGTGA
 
Protein sequence
MRVRIALFVV IALVGTGFTG ARYAGLVPGD EYPVHVRLAR TGGLFAGGEV THRGVRVGRV 
DRVRLVDGVV QADLLIDGGV AIPRAARAVV TNRSAVGEQY LDFKPGDGEG SGDLAGDLAV 
GEVVPIGRTA LPPPVEGVLT ELDDLARSVP QDALRTVVDE LDLALRDTGP DLGLLLDSVR 
DLTATAGEHL PRTSALLRDA GIVLDTQLDQ AAAITSFAGS AAQVAAALER GDADLRRVIE 
AGPGVGEEVG GLLRESGGGL GATLANLVTT ADVLLRRQGE LEQVLVSLPR AVEVGQSVYS 
GGGVSLGLAL TFFEPPPCTQ GYEATARRGA LDTGPAAFNA GAACTLPR