Gene Amir_2052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2052 
Symbol 
ID8326241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp2276202 
End bp2276852 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content72% 
IMG OID644942603 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003099844 
Protein GI256376184 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1174] ABC-type proline/glycine betaine transport systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACTTCT GGGACTTCGT GGCGGACCGG TGGAGCAGGC TGCTCACCGA GTCGCTGCTC 
CACCTGAGCG CGGTCGTGCA GTGCACGATC ATCGCCGCTC TGATCGGTGT CGGCGTGGGG
ATCGCCGTCT ACCGCAGCCC GCTGGGCTCG GCCACGGCCA CGGCCCTGGC CAGCGCGGTG
CTCACCATCC CCTCCTTCGC CCTGCTGGGA CTGCTGATCC CGCTGCTGGG CCTGGGCGCG
CCGCCCACGG TGGCCGCGCT GGTGCTCTAC GGCCTGCTCC CCGTCGTGCG CAACACGATC
GTCGGCCTGA GCGGGGTCGA CCGGTCGATC CGGGACGCCG CGCGCGGCAT CGGCATGAGC
CGCTTCAGCG TGCTCACCTC GGTGGAGCTG CGCCTGGCGT GGCCCGCGAT CCTGACCGGG
ATGCGCGTCT CGGCCCAGAT GCTGATGGGC ATCGCCGCGA TCGCCGCCTA CGCGCGCGGC
CCCGGCCTCG GGGTGGAGAT CTTCGCCGGG CTGACCAGGG CGGGCAGTGC CAACGCCACC
AACCAGGCGA TCGCCGGAAC GCTCGGCGTC ATCGTCCTCG CGCTGCTCCT CGACGGGGTC
TTCGCGCTGA TCGGACGCTA CACCGTCTCT AGGGGGATCC GTGGCCAGTG A
 
Protein sequence
MNFWDFVADR WSRLLTESLL HLSAVVQCTI IAALIGVGVG IAVYRSPLGS ATATALASAV 
LTIPSFALLG LLIPLLGLGA PPTVAALVLY GLLPVVRNTI VGLSGVDRSI RDAARGIGMS
RFSVLTSVEL RLAWPAILTG MRVSAQMLMG IAAIAAYARG PGLGVEIFAG LTRAGSANAT
NQAIAGTLGV IVLALLLDGV FALIGRYTVS RGIRGQ