Gene Amir_2052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2052 
Symbol 
ID8326241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp2276202 
End bp2276852 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content72% 
IMG OID644942603 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003099844 
Protein GI256376184 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1174] ABC-type proline/glycine betaine transport systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACTTCT GGGACTTCGT GGCGGACCGG TGGAGCAGGC TGCTCACCGA GTCGCTGCTC 
CACCTGAGCG CGGTCGTGCA GTGCACGATC ATCGCCGCTC TGATCGGTGT CGGCGTGGGG 
ATCGCCGTCT ACCGCAGCCC GCTGGGCTCG GCCACGGCCA CGGCCCTGGC CAGCGCGGTG 
CTCACCATCC CCTCCTTCGC CCTGCTGGGA CTGCTGATCC CGCTGCTGGG CCTGGGCGCG 
CCGCCCACGG TGGCCGCGCT GGTGCTCTAC GGCCTGCTCC CCGTCGTGCG CAACACGATC 
GTCGGCCTGA GCGGGGTCGA CCGGTCGATC CGGGACGCCG CGCGCGGCAT CGGCATGAGC 
CGCTTCAGCG TGCTCACCTC GGTGGAGCTG CGCCTGGCGT GGCCCGCGAT CCTGACCGGG 
ATGCGCGTCT CGGCCCAGAT GCTGATGGGC ATCGCCGCGA TCGCCGCCTA CGCGCGCGGC 
CCCGGCCTCG GGGTGGAGAT CTTCGCCGGG CTGACCAGGG CGGGCAGTGC CAACGCCACC 
AACCAGGCGA TCGCCGGAAC GCTCGGCGTC ATCGTCCTCG CGCTGCTCCT CGACGGGGTC 
TTCGCGCTGA TCGGACGCTA CACCGTCTCT AGGGGGATCC GTGGCCAGTG A
 
Protein sequence
MNFWDFVADR WSRLLTESLL HLSAVVQCTI IAALIGVGVG IAVYRSPLGS ATATALASAV 
LTIPSFALLG LLIPLLGLGA PPTVAALVLY GLLPVVRNTI VGLSGVDRSI RDAARGIGMS 
RFSVLTSVEL RLAWPAILTG MRVSAQMLMG IAAIAAYARG PGLGVEIFAG LTRAGSANAT 
NQAIAGTLGV IVLALLLDGV FALIGRYTVS RGIRGQ