| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1985 |
|---|
| Symbol | |
|---|
| ID | 8326170 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 2202055 |
|---|
| End bp | 2202744 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 644942534 |
|---|
| Product | Clp domain protein |
|---|
| Protein accession | YP_003099779 |
|---|
| Protein GI | 256376119 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.786623 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGAAGA TCAACGTCTA CCTGCCGGAC GACCTGGCCG AGACCGTGCG CGCGCTGAAC
GTTCCGGTCT CCGCGATCTG CCAGCGCGCG CTGGAGCAGT CCGCGCGCCG GGTCGCCGCA
ATCCGCGCCA CCGACCCCGC CGACCTGTCC GCGCTCGACG GGGCCCGCGC CACCGACCGG
TTCCGGGGCG CGCTGCGGCT GGCCGTCGGG CGCGCCACCG GCGAGGTCGG CACCTCCGAC
CTGCTGCACG GCCTGCTGTC CGAGGGCGAC AACCTCGCGC TGCGCGTGCT GCCCACCCTC
GACGTGGACG TCGCCGCGCT CCGCCGGGCC GTCCCCGAGC GGCCCGGCGC CACCGGGGGG
TCGAGCTGGA GCGCGGAGGC CGCGAGCGCG CTGGAGCTGG CCGTGGTGGA GGCGCTGGGG
CTCGGGCACA ACTACGTGGG CTGCGAGCAC CTGCTGCTCG GGCTGGTCGT CGAGCCCGAC
GGCGGCGGCG GGCGGGCGCT GCGCGAGGCC GGGGCGGACG TGCGGTCGGT GCGGCGGGCG
GTGACCGCCG CGCTGAGCGG GTACGAGCAG CTGCGCGCCA ACACGCCCGC GACCGACCAG
GACGCCGCGC TCGCCGCCGT GACCGGGCTG GTGCGGCGGG AGCTGGCGCC GCTGGTGGAG
CGGATCAGCA GGTTGGAGCA GCGGGGGTGA
|
|---|
| Protein sequence | MPKINVYLPD DLAETVRALN VPVSAICQRA LEQSARRVAA IRATDPADLS ALDGARATDR
FRGALRLAVG RATGEVGTSD LLHGLLSEGD NLALRVLPTL DVDVAALRRA VPERPGATGG
SSWSAEAASA LELAVVEALG LGHNYVGCEH LLLGLVVEPD GGGGRALREA GADVRSVRRA
VTAALSGYEQ LRANTPATDQ DAALAAVTGL VRRELAPLVE RISRLEQRG
|
|---|
| |