Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1875 |
Symbol | |
ID | 8326060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 2075861 |
End bp | 2076955 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 644942424 |
Product | hypothetical protein |
Protein accession | YP_003099669 |
Protein GI | 256376009 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCGACC GACCAGGTGG TCCCACCGAC CCCGACTTCG TGGGCCCGCC GCTGCCCATC CCGGTGCAGC GGCTGCTGGG CGAGGCCGAG CACGCGCTGG GCGGGCTGGA CGAGGCCGCG TGGCGCCTCC CGGACCGCTC GGTGCTGGCC CGCTGCGCCC GCATCCGCGA CGCCAGGGGC GCGGCGGCGC GGGCGGGCCG CAGCGCGGAC CTGGTGGACG CCTGGCTGTT CGCCGACCTC GGCACCGGGA CGCCGCCGGA CCTGCTGCTG CGCGCGGTGT CCCCTGGGGA GGACGAGCAG GACGTGCCGC CCTCCCCGGT CTCGGAGGGC GCGCACCCGC CGTTCGACCG CTACCTGGCC GCGCTGGAGC TGGGGGCGGA CCTGCTGGCG CGCGGGCGGG CGCTGGACGT GCAGCTGCTG GCCGAGGTGG GCGCGGTCCG GGCGCACGGC AGGGGCGCGC CGCCGCTGGC CGGGTCGACG GCGCTGCGCA CCTGGTCGGT GTCCACGCGC GCGCTCGAAC CGCTTCCCCG CATCGCGCGG CTCGCGCTGG AGCACCGGCT GCTGGCGCTG CACCCGCCGT TCCCGGACGC CGCCGCCGCG GTCACCTCGC TGCGGCTGGT CGGGTCGGGG CTGCTGCGCG ACCAGATCCT GCCGCTGTCG GTGTGGCTGG ACACGCACGC GGACCGGCGC GACGCGCTGC TGCGCGGATC ACCGGCGGGG TGGGTGGAGT TCTTCGCGCG CGGGGTGCGC GAGCTGGCCA GGGCGCAGAC GAACCTGATC GAGGAGCTGG CGGCGCTGCG GGCGCACCAC CTGAACCTGG TGCCGCACCC GCGCAGCGCC CGGCGCGTGG CGGCCGACCT GGTGGCGAGC CCGGTGCTGA CCCACCCGGC GCTGGTGCGG CGCTACGGGT TCACCGCGAA GACGGCCACG GACGTGACGC GCAGGCTGCT GGAGCTGGGG CTGGTGACGA CGCTGGACGA CCGGCCCTAC CGGAAGGTGT TCCTGTGCGT GCAGGCGCTG CGGCTGCTCA CGACCGAGCC GCCTGGGGAG CCGATCCGGG ATGAGGACGT GTTCAAAGCC GGCTCGCCCG AATAG
|
Protein sequence | MTDRPGGPTD PDFVGPPLPI PVQRLLGEAE HALGGLDEAA WRLPDRSVLA RCARIRDARG AAARAGRSAD LVDAWLFADL GTGTPPDLLL RAVSPGEDEQ DVPPSPVSEG AHPPFDRYLA ALELGADLLA RGRALDVQLL AEVGAVRAHG RGAPPLAGST ALRTWSVSTR ALEPLPRIAR LALEHRLLAL HPPFPDAAAA VTSLRLVGSG LLRDQILPLS VWLDTHADRR DALLRGSPAG WVEFFARGVR ELARAQTNLI EELAALRAHH LNLVPHPRSA RRVAADLVAS PVLTHPALVR RYGFTAKTAT DVTRRLLELG LVTTLDDRPY RKVFLCVQAL RLLTTEPPGE PIRDEDVFKA GSPE
|
| |