Gene Amir_1718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1718 
Symbol 
ID8325903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp1878010 
End bp1879203 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content71% 
IMG OID644942267 
Productpeptidase S8/S53 subtilisin kexin sedolisin 
Protein accessionYP_003099512 
Protein GI256375852 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1404] Subtilisin-like serine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGGAGT CTCGACACCA CCGGTACCTG GCCGGCGTCG GAACCGCCGC ACTGCTCATG 
GGCGTCATGG CCACCCCGGC CGGCGCCGCC ACCGGTGAGA TCCTCTCGGC CGACGCCGAG
AAGAAGGTCC AGAACAGCTT CATCGTGAAG CTGAAGGACG GCTACACCGC CGCCTCCTCC
ACCGAGGCCG TCACCGCCAA GCTGACCTCC CGCTTCGGCG GCCAGGTGAA GCACACCTAC
AGCAGCATCA ACGGCTTCGC CGTGTCGCTG TCCGAGTCCG CCGCCAAGCG GCTCGCCGCC
GACCCGTCGG TCGAGTACGT CGAGCAGGAC CAGGTCTTCA GCATCCAGGC GACGCAGACC
AACCCGCCGT CGTGGGGCCT GGACCGCATC GACCAGCGGA ACCTGCCGCT GAACTCCTCG
TACAGCTACA CCTCCACCGG CTCCGGCGTG CGCGCCTACG TCATCGACAC CGGTGTCCGC
ATCGCCCACA ACGCCTTCGG CGGCACCGCC GTCAACGGCT ACGACGCGGT CGACGGCGAC
AACGTCGCCC AGGACGGCAA CGGCCACGGC ACGCACGTCG CGGCCACCGT GTCCAGCGCC
TCCTACGGCG TCTCCAAGGC CGCCCAGATC GTCGCGGTCC GCGTGCTCGA CAACGCGGGC
TCCGGCACCA CCGCCGGCGT CGTCGCGGGC ATCAACTGGG TGACCAACAA TCACGTCAAG
CCCGCTGTCG CCAACATGAG CCTCGGCGGC GGCGCGTCCA CCTCGCTGGA CAACGCCGTG
GCCAGCTCCA TCAGCGCGGG CGTCACCTAC GCGGTCGCGG CGGGCAACAG CAACGCCAAC
GCCTCGTCCT ACTCGCCCGC CCGCGTGGCC TCGGCGCTGA CCGTCGGCGC GACCACCAGC
ACCGACGCCC GCGCGTCGTA CTCCAACTAC GGGGCCGTCG TGGACATCTT CGCGCCGGGC
AGCTCCATCA CCTCGGCGTG GAGCACCTCC AACACCGCGA CCAACTCCAT CTCCGGCACC
TCGATGGCGT CCCCGCACGT CGCGGGCGCG GCGGCGCGCT ACCTGTCGAC CACCCCGTCG
GCGACCCCCG CGCAGGTGGC GACCTACCTG ACCGGCCAGG CGACCACGGG CAAGGTCACC
AGCCCCGGCA CCGGTTCGCC GAACCGCCTG CTGTACCTGG CCCCGACCGC CTGA
 
Protein sequence
MLESRHHRYL AGVGTAALLM GVMATPAGAA TGEILSADAE KKVQNSFIVK LKDGYTAASS 
TEAVTAKLTS RFGGQVKHTY SSINGFAVSL SESAAKRLAA DPSVEYVEQD QVFSIQATQT
NPPSWGLDRI DQRNLPLNSS YSYTSTGSGV RAYVIDTGVR IAHNAFGGTA VNGYDAVDGD
NVAQDGNGHG THVAATVSSA SYGVSKAAQI VAVRVLDNAG SGTTAGVVAG INWVTNNHVK
PAVANMSLGG GASTSLDNAV ASSISAGVTY AVAAGNSNAN ASSYSPARVA SALTVGATTS
TDARASYSNY GAVVDIFAPG SSITSAWSTS NTATNSISGT SMASPHVAGA AARYLSTTPS
ATPAQVATYL TGQATTGKVT SPGTGSPNRL LYLAPTA