Gene Amir_1707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1707 
Symbol 
ID8325892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp1864829 
End bp1865713 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content77% 
IMG OID644942257 
Producthypothetical protein 
Protein accessionYP_003099502 
Protein GI256375842 
COG category 
COG ID 
TIGRFAM ID[TIGR01445] intein N-terminal splicing region 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATGAAA ACGGGGTGGG CGGGCGCGTG GGCGCGCACT GCCTGGCCGC TGACACGCCC 
GCGCTCCTGG CGGACGGGAG CACCCGGCCG ATCGGCGCGC TGCGCCCCGG TGACCGGGTG
TTCGGGACGC GGGACGGGCG TTACTCGCCG ACAGTCGTGA TCGCGCGCTC GACCGCGACA
CGGCCTGCCT ACCGGGTGTC ACTCGCCGGT GGGACACAGG TCGTGTCGGG CGCGGGGAAC
CGGTTGCGCA CCGACCTCGG CTGGCGGGCG CTGACACCCG GCGGCGAGCG GCTCCACCTC
ACGCGCGGGA CGCGGGTGCA GGGCACCGGG CGCTTCGCGG CCCCGCCCGA GCGGAATCGG
GACTACCGGC TCGGCTACCT GTGGGGCGCG GTGCGCGGCG GGCCGCCGGT GGTGCCCGAG
GTGCTGGCGC GGGTGCGCGA GTTCGCCGGT GGCGGGGAGC CGCGCGAGCG GGACCTCGTG
GAGTGGCCGA CGCAGCTCGG GGACGACTGG GCCAAGGGGT TCCTGGCCGG GGTGTTCGAC
GTGCGCGGGG CGGCGGTGGG CGGGCAGGTC GTGCTGTCCA GCCCGGACAG CGCCGTGTTC
GAGGCGGTCG TGGTCGCGCT GCTGCGGCTG CGGGTGCCGC ACTCGGTCGA GGTCCGGGGC
GTCCGGGTGA CCGGGGCGCC CGCCGAGCGG CTGCGGTTCC TGCACCTGGT CGGGCCGGTG
CTGGCGCGGC CCGCGGTGCT GGAGGGCGTG CAGGTCGGCG GGGCGCCCGC GCTCGGGGTC
GTGTCGGTGG AGTCGCTGGG GATCGAGGTG GAGATGGGGG CGGTGACCAC GGAGAGCGGC
GATCTGGTGG TCAACGGGCT CATCGCTTGC GCGGACGGGC GGTGA
 
Protein sequence
MHENGVGGRV GAHCLAADTP ALLADGSTRP IGALRPGDRV FGTRDGRYSP TVVIARSTAT 
RPAYRVSLAG GTQVVSGAGN RLRTDLGWRA LTPGGERLHL TRGTRVQGTG RFAAPPERNR
DYRLGYLWGA VRGGPPVVPE VLARVREFAG GGEPRERDLV EWPTQLGDDW AKGFLAGVFD
VRGAAVGGQV VLSSPDSAVF EAVVVALLRL RVPHSVEVRG VRVTGAPAER LRFLHLVGPV
LARPAVLEGV QVGGAPALGV VSVESLGIEV EMGAVTTESG DLVVNGLIAC ADGR