Gene Amir_1688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1688 
Symbol 
ID8325873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp1844502 
End bp1844981 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content71% 
IMG OID644942238 
ProductTspO and MBR like protein 
Protein accessionYP_003099483 
Protein GI256375823 
COG category[T] Signal transduction mechanisms 
COG ID[COG3476] Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGATC TGGCGGCACG ACGACACCCG GTGGTAGGAC TGGCGGCGTT CGGCGCGGCG 
GTGGCGCTGG TCGCCGTGGC GGGATCGCTG GCCTCGATGT CGGCGGCATC CGAGTACCAG
GCGCTGGAGA CCCCGTCGTG GGCCCCGCCG CCGTGGCTGT TCGGTCCGGT GTGGACCGTG
CTCTACGCGA TGATCGCGGT GTCCGGGTGG CTGTTCTGGA AGCGCGAGGG CGTGCGCTGG
GAGCTGGGGC TGTTCGCGGC GCAGCTCGTG CTGAACGGCC TGTGGACCCC GCTGTTCTTC
GCCGCCGACC TGTACGCGGT CGCGCTGGCG GACATCGTCC TGCTCTTCGC CTCGATCGTG
GCGCTGATCG TGGTGTTCCT GCGGCGCGGC CACCGGGCGT CCGGGCTGCT GCTCGTGCCG
TACCTGCTGT GGGTCGGGTT CGCGACGGCG CTCAACGCGG CGATCGTGGC GCTGAACTGA
 
Protein sequence
MADLAARRHP VVGLAAFGAA VALVAVAGSL ASMSAASEYQ ALETPSWAPP PWLFGPVWTV 
LYAMIAVSGW LFWKREGVRW ELGLFAAQLV LNGLWTPLFF AADLYAVALA DIVLLFASIV
ALIVVFLRRG HRASGLLLVP YLLWVGFATA LNAAIVALN