| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1681 |
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| Symbol | |
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| ID | 8325866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 1837538 |
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| End bp | 1838614 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644942231 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003099476 |
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| Protein GI | 256375816 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.471831 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGTCA TCCCCACCAC GACCGAGGCC GCGCCCGCCG CGCCCGCCAG GCGCAGCAGG
CTGCGGTTCG TCGCGAACCC CAAGGCCACC ACCGGGCTCG TCGTGCTCGG CCTGTTCGCG
CTGATCGCCG TGATCGGCCC GTGGATCGCG CCGCACGACC CGTCCGCGCG CAGCTCCGAC
GTCATGCAGG GCCCGTCGGC GGCGCACTGG TTCGGCACCA CCCACCTCGG CCAGGACATC
TTCAGCCAGG TGATCGTGGG CACCCGCAGC GTCATGCTCG TCGGGTTCCT CGCCGCCGCC
ATCGCCACCG TGCTGTCGGT GCTGATCGGC GTCACCTCCG GCTACCTCGG CGGGTTCGGC
GCGGAGGGGC TCTCCGCGCT GTCCAACGTC TTCCTGGTCA TCCCGGCGCT GCCGCTGATC
ATCATCATCA CCTCGTCGCT GCCCCAGACC ACCGACGTCA CCATCGCGCT GGTCATCGGG
CTCACCTCGT GGGCGTGGAA CGCGCGGGTG CTGCGCGCGC AGACGCTGTC GCTGCGCCGC
AGGGACTACG TGGAGGCCGC GCGCGCCACC GGCGAGTCCA CCTGGCGGAT CATCGTCTTC
GAGATCATGC CGAACCTGAC GGCGGTCATC GCCTCCGGCT TCGTCGGCAC GGTCATCTTC
GCCGTGGTCT CCGAGATCAC CCTGGCGTTC ATCGGGGTGT CCGCGAGCGG CACCTGGAAC
TGGGGCACCG TGCTGTTCTG GGCGCAGGGC CAGCAGGCGC TCGCCCAGGG CGCGTGGTGG
TGGTTCGTGC CCGCCGGGCT CGCGATCGCG TTCCTGGGCA CCGCGCTGTC GCTGGTGAAC
TTCGGCATCG ACGAGTTCGT CAGCCCGCGC CTGCGCGGCG GCGGCAAGAC CACCGCGAAG
ACCGAGGACG GCCGCACCGT GCGGATGCGC GTCGGCTTCA CGCCCGTGCT CGCGCCCGCG
CCGAAACCCG CCTCACCCGC GCCCGCGCCG GAACCCGCCG CGCCGGAACC CGCTGCGCGC
AAGGGAAAAC CCGTGAAGGA CCATACTGCC GACCACACCG GGGAGGGGGA GTCGTGA
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| Protein sequence | MAVIPTTTEA APAAPARRSR LRFVANPKAT TGLVVLGLFA LIAVIGPWIA PHDPSARSSD
VMQGPSAAHW FGTTHLGQDI FSQVIVGTRS VMLVGFLAAA IATVLSVLIG VTSGYLGGFG
AEGLSALSNV FLVIPALPLI IIITSSLPQT TDVTIALVIG LTSWAWNARV LRAQTLSLRR
RDYVEAARAT GESTWRIIVF EIMPNLTAVI ASGFVGTVIF AVVSEITLAF IGVSASGTWN
WGTVLFWAQG QQALAQGAWW WFVPAGLAIA FLGTALSLVN FGIDEFVSPR LRGGGKTTAK
TEDGRTVRMR VGFTPVLAPA PKPASPAPAP EPAAPEPAAR KGKPVKDHTA DHTGEGES
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