| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1619 |
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| Symbol | |
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| ID | 8325804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 1781757 |
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| End bp | 1782734 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644942169 |
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| Product | integrase family protein |
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| Protein accession | YP_003099414 |
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| Protein GI | 256375754 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.771515 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACCTG AACGCCTTCC CCGCCCCACC GCCGCGCAGT GGTCCACCTG GCTCGACGAC
TGGGACCGCT CGCTGCGCGC CAAGAACCAC CCGCGCACGA CCCGCTACAA CTACCAGCTC
GCCGTGACCC AGCTCGCGGA CTACCTCCTG CACGAACTCG CCCTCGACTT CGACACCCGG
CCACCCAACA CCGCCGAGGC CGCCAAGGAC CCGATCGCCG TCCGGCGCCC GCACGTCGAG
GCGTTCGTCA TCTGGATGAC CGACACCCGC TCGGCCGCCT CGGCCAAGTC GAAGTTCAAG
GCCCTGCAGC AGTTCTTCAA CTACATCGCC GAGGAGGAAG AACTCGATCA CCACCCGATG
GCCAAGATGC GCCAGCCTAA GGTCGACGAG AAGCAGCGCC GGGTCATCCC CGACGAGCAG
ATCGCCGCGT TCCTGGCCGC TCTGGAAGGC AAGGACTACC GCAGCCGCCG GGACTTCGCC
CTCGTGCGCC TCTACTTCGA GACCGGCGGT CGCCTCGCCG AGGTCGTCAA CGCCGGCCTC
GGGGACCTCG ACCTGAAGCT CGACGTGCTC CACGTCCGCG GCAAGGGCGG CAAGCACAGG
AGCCTGCCGT TCGCGGCGAA GACGGGGCAG GCGGTCACCC GGTACCTGCG GGCCCGCGAG
CGGCACCTGG CGGGCCGGGA GAGCGCCGCG CTGTGGCTGC CTGAGAACCT GCCCAAGGGG
GCGCCCACGC CGCTGACCGT GAGCGCCGTG AAGTCGATGT TCCGGCGGCG GGCCGACGCG
GTCGGACCGA GGATCCATGC GCACCTGTTC CGGCACACGT TCTCGCACAA CTGGCTGCGG
AACGGCGGCT CGGAGACGGA CCTCATGCGC CTGATGGGCT GGTCCACCCG CGCCATGCTC
CAGGTCTACG GGGCCAGCGC GGCCGACGAA CGCGCCATCC AGGCGCACCA GAAGATGGCG
ATGGGGGACA GGCTGTGA
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| Protein sequence | MPPERLPRPT AAQWSTWLDD WDRSLRAKNH PRTTRYNYQL AVTQLADYLL HELALDFDTR
PPNTAEAAKD PIAVRRPHVE AFVIWMTDTR SAASAKSKFK ALQQFFNYIA EEEELDHHPM
AKMRQPKVDE KQRRVIPDEQ IAAFLAALEG KDYRSRRDFA LVRLYFETGG RLAEVVNAGL
GDLDLKLDVL HVRGKGGKHR SLPFAAKTGQ AVTRYLRARE RHLAGRESAA LWLPENLPKG
APTPLTVSAV KSMFRRRADA VGPRIHAHLF RHTFSHNWLR NGGSETDLMR LMGWSTRAML
QVYGASAADE RAIQAHQKMA MGDRL
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