Gene Amir_1527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1527 
Symbol 
ID8325707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp1685125 
End bp1686156 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content76% 
IMG OID644942074 
Producthistidine kinase 
Protein accessionYP_003099324 
Protein GI256375664 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCGTCA GCCGGGTGGT CGAGTCGTCG CCGCGCTTCC CCGAGGGCAG CACGGTCGTC 
GTCGACGGGG TCGAGGTCGA CGCGGCCTCC CTCACGGACT TCCTCGGCAG GCAGGCCCAG
GACGACGTCC TGCGCTCGGG CAGCGTGGCC TTCCTGTGCG TGGTGGTCGC CGCCGCGCTG
CTGGCCTGGA CGATCACCGG GCGGGTGCTG CGACCGGTGC ACGAGGTCAC CGACGCCGCC
CGCAGGCTCT CCGCCGAGTC GCTGGGGGAG CGGCTGCGCC TGGTCGGCCC GCGCGACGAG
GTCGCGGAGC TGGCCGACAC CTTCGACGAG ATGCTCGACC GGCTGCAGGC CGCGTTCGAC
TCGCAGCGGC GGTTCGTCGC CAACGCCTCC CACGAGCTGC GCACCCCCCT GTCGGTGATC
CGCACCGAGC TGGACGTGAC GCTGTCCGAC CCGGACGCGG ACGCGGAGGA GCTGCGGCGG
ATGGCCGGGG TGGTGCGCTC GGCGGGGTTG CGGGCCGAGC AGCTGGTGAG CGCGCTGCTG
CTGCTCGCGC GCACGGACGG CATCGGGCTG GCGGTGCGGG AGCCGGTGGA CGTGTCCGCG
CTCGTGGAGT CGGCGTGGCG CGCGGTGCGG GCCGAGGCCG AGCAGCGCGG GGTGCGCCCG
GTGTTCCACC TCGCCCCGGC GCCCGCGGTC GGCGACCCGG CGCTGCTGGA GCGCATCGCG
GGGAACCTGC TGGAGAACGC GGTGCGGCAC AACGCGCCGG ACGGGTGGGT CGAGGTGCGC
ACCGAGGGCG GGCCGGTGTG GACGGTGCTG CGGGTGTCGT CGTCCGGTCA GCTCATCGCG
CCGGAGCTGG TGGAGAAGCT GTTCGAGCCG TTCCGGCGCG GTGGCGCGGA CCGGACCGCG
CGCACGGGGA CGGGCCTTGG CCTGTCGATC GTGCGGGCCG CGGTGGCCGC CCACGGGGGA
AACGTGCAGG CAGCGGCGGT GCCGGGGGGT GGCCTGTCGG TCACCGTGCA CCTGCCGGTC
GCCCCCGCGT GA
 
Protein sequence
MLVSRVVESS PRFPEGSTVV VDGVEVDAAS LTDFLGRQAQ DDVLRSGSVA FLCVVVAAAL 
LAWTITGRVL RPVHEVTDAA RRLSAESLGE RLRLVGPRDE VAELADTFDE MLDRLQAAFD
SQRRFVANAS HELRTPLSVI RTELDVTLSD PDADAEELRR MAGVVRSAGL RAEQLVSALL
LLARTDGIGL AVREPVDVSA LVESAWRAVR AEAEQRGVRP VFHLAPAPAV GDPALLERIA
GNLLENAVRH NAPDGWVEVR TEGGPVWTVL RVSSSGQLIA PELVEKLFEP FRRGGADRTA
RTGTGLGLSI VRAAVAAHGG NVQAAAVPGG GLSVTVHLPV APA