| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1489 |
|---|
| Symbol | |
|---|
| ID | 8325669 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 1644703 |
|---|
| End bp | 1645836 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 644942036 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003099286 |
|---|
| Protein GI | 256375626 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGTGACCA CCGTCGCGCA CGCCTACCCC TGGGACCTCG TCGGCGACCC GGCGGCGGCC
GAGCGGATCG CCGCGCTGGG CGTGGACGCG GTGGCGCTGG CCGCCTCGTA CCACACGGTC
CGCGCCGCCA CCCCGTTCCA CCCGAGGCGC CGGCTGGTCG ACGCCCGGCA CGCCGCGCTC
TACCTGCCGG TCCGGCCGCA GGCGTGGGGC AGGCTGGTCC CCGCCGCGCC GAGCTGGGTC
GACGGGGAGA ACCCGTACGG CGCGGCCTCC GACGCCCTGC GCGCGGTCGG GCTGCCCGTG
CACGCCTGGA CCGTGCTCAC GCACAGCAGC AGGCTCGGCG ACCTGCACCC GGACCTGGTG
GTGCGCAACG CCTTCGGCGA CCGCTACCCG TACGCCCTGT GCCCGGCCAA CCCGGACGTC
GCCGAGTACG CCAAGAACCT GGTGACCGAG GTGCTCGACC AGGGCGCGCC GGACGGCGTG
GTGCTGGAGG CCTGCGGGCC GCTCGGCCTC ACGCACGGCG GGCACCACGA GAAGACCGAC
GGCGCGGACT GGGGCCCGGT CGCCCAGAAG CTGCTGTCGC TGTGCTTCTG CGCGGCCTGC
GAGCGGCGCT ACCCCGACGC GGACGCGGTC CGGGCCGCCG TGCGCGCGGG CGTCGACGGC
GGGGCGTCCA GCGTCGAGGA GGCGCTGGGG GAGTGGGCCG CCGGTGTGCG GGCCACGCGC
ACGGCCCTGT CCCGCGACCT GCGCCGCGAC CTGGTCGGCC TGGTCCGCGC CGCCGGGGCC
AAGGCGGTCG TGCACGCGAC CGCCGACCCG TGGGGCACCG GTCCGTTCGC GACGGTCGCC
GACGGCGTCG GGACCGAGGT GGACGTGCTC ACCCTGACCT GCTGGGGCGG CCCCGAGGCG
TCCCTGCCCG CCATCGAGGC ACTGCGGGAG GCGGCGCCGG GCGTCCCGAT CGCCGCCTAC
GTGCTGGCGC TGCCGCCCAG GAACGCCGAC GCGGCGGCCC TGGTCGAGGA GTGGCGGCAC
TACGGCGTGG ACGAGCTGCA CCTCTACCAC GCGGGCCTGG CCTCGGCGGA CCGGATGTCG
GCGATGGGCG AGGCGCTGGG CGCCCTCCGG GGGCAGCCGG TCCTTCACCC TTGA
|
|---|
| Protein sequence | MVTTVAHAYP WDLVGDPAAA ERIAALGVDA VALAASYHTV RAATPFHPRR RLVDARHAAL
YLPVRPQAWG RLVPAAPSWV DGENPYGAAS DALRAVGLPV HAWTVLTHSS RLGDLHPDLV
VRNAFGDRYP YALCPANPDV AEYAKNLVTE VLDQGAPDGV VLEACGPLGL THGGHHEKTD
GADWGPVAQK LLSLCFCAAC ERRYPDADAV RAAVRAGVDG GASSVEEALG EWAAGVRATR
TALSRDLRRD LVGLVRAAGA KAVVHATADP WGTGPFATVA DGVGTEVDVL TLTCWGGPEA
SLPAIEALRE AAPGVPIAAY VLALPPRNAD AAALVEEWRH YGVDELHLYH AGLASADRMS
AMGEALGALR GQPVLHP
|
|---|
| |