Gene Amir_1457 details

Gene Information

• Locus tag: Amir_1457
• ID: 8325637
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: +
• Start bp: 1606759
• End bp: 1607457
• Gene Length: 699 bp
• Protein Length: 232 aa
• Translation table: 11
• GC content: 77%
• IMG OID: 644942004
• Product: Deoxyribonuclease V
• Protein accession: YP_003099254
• Protein GI: 256375594
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1515] Deoxyinosine 3'endonuclease (endonuclease V)

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.162733
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACCCCCG ACCCCACCGC CGCTCCCGTG ACGCGCGCCC AGGCCCGCCG CCCCGCCGAC 
GTCCGCACCG CCGAGGAGGC GATCGCCGAG CAGGAGCGCC TGCGCCCGCT GGTCCGCCCC 
ACCGCCGACC CCGGCCTCGA CGTCCGCCTC GCCGCGGGCC TGGACGTGGG CTACGCCGAC 
GACGACCGCC TGGTCGCCGC GATCGTCGTG GTCGACGTCG CCACCATGGA GACCGTGGAC 
ACCTCGGTCG TGCGCGCGAC CGCCGACTTC CCCTACGTCC CCGGCCTGTT CGCGTTCCGC 
GAGCTGCCGT CCCTGCTCAC CGCACTGGAC CGCCTCGCCA CCACCCCGGA CCTGCTGGTG 
TGCGACGGCC AGGGCCTGGC CCACCCGCGC CGGTTCGGCC TGGCCTGCCA CCTGGGCGTC 
CTGGCCGACC TGCCGAGCGT CGGCGTCGCC AAGACCCCGA TGGGGCACTT CGAGCGGCCC 
GGCCCGGCGC GCGGGGCGTC CACCGACCTG CTCGACGACG GCGAGGTCGT CGGCCGGGCC 
CTGCGCACCC GCGCGGGCGT GAAACCGGTC TTCGTGTCCG TCGGCCACCG GATCGACCTG 
GACCGCGCGT GCGCGGAGGT GCTGCGGCTG TGCCGGGACT ACCGCCTCCC CGAGACCACC 
CGCCGCGCCG ACGCGCTGGG CAGGCGCCAC CTCCGCTAG 

 

Protein sequence

MTPDPTAAPV TRAQARRPAD VRTAEEAIAE QERLRPLVRP TADPGLDVRL AAGLDVGYAD 
DDRLVAAIVV VDVATMETVD TSVVRATADF PYVPGLFAFR ELPSLLTALD RLATTPDLLV 
CDGQGLAHPR RFGLACHLGV LADLPSVGVA KTPMGHFERP GPARGASTDL LDDGEVVGRA 
LRTRAGVKPV FVSVGHRIDL DRACAEVLRL CRDYRLPETT RRADALGRRH LR