Gene Amir_1446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1446 
Symbol 
ID8325626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp1597325 
End bp1598710 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content74% 
IMG OID644941993 
Producthistidine kinase 
Protein accessionYP_003099243 
Protein GI256375583 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGCTCCA GGCTGCTCGG CGTGGTGCTC GCCCTGGTGG TTCTGGTGCT GGTGGGGATG 
GGTGTGCCGC TCGGTCGCGG GGTCGCGGCG ACCGAGCAGC AGGAGATGTT CCTGGACCGG
CTGACCGACA CCGCGCGGTT CGCCTCGCTG GTGCAGCGGC CGGTCATCGA CGACCAGCCG
GAGGTCGTGC TCCCCGAGCT CAAGCGTTAT TCAGAGCTTT ACGGGATCGA CGTCGTGTTG
CTTCGGCGTG ACGGCCAGGT CGCGCTGTCC AGCGCCGATC GGGAGCCCGA CCTGTCGTCA
CCGGCGGTGC AGGAGACGGT CCGGGGTGCC CTGGCCGGGC GACTGCCGAG CAACCCCGAC
CTGGTGATGC CGTGGCAGGA CCACCCCCTG GTGGTGGCCG AGCCGGTGCT GGTCGACGGC
GAGGTCCGTG GCGCCGTGGT GACCTTCTCC CCTACCGGCA AGACCAGGAC GGGGGTCGCC
CTGTGGTGGC TGGCGATACT GGCCGGGGCC CTCGGCGCGC TCGCGCTGGC GGTGCTCGCG
GCGCTGCCCC TGGTGCGCTG GATGCTGCGG CCGGTGCTGG CGCTGGACGA CGCGACGAGC
GGGCTGGTCG GCGCGATCGT CTCGGGCAGG CCGGTGCCGC CGGTGGGCGG CTCGTCGGGG
CCGCCGGAGC TGCGGCAGCT CGGGCGCTCG TTCGACCAGA TGGCTGCCAG CGTCGGCGAC
GTGCTGGCCG CCCAGCGGGC GTTCGTCGCC GACGCCTCCC ACCAGCTGCG CAACCCGCTG
ACCGCGCTGA AGCTGCGGCT GTCGAACCTG GAGGACGCGG TCACCGAGGA GGGCAGGCCG
CACCAGGCGG CGGCGCTCGC CGAGGCGAAC CGGCTCAACC GCATCCTGGA CGAGATGCTG
GCGATGGCCC GCGCCGAGTC GTCCTCGGTC GCCCCGGTCG AGGTGGACGT GGACCGGGCG
GTGGCGGGCA GGCTGACCGC GTGGATGCCC GCCGCGACCG CCCGCGACGT GCACCTGGTG
CTCGGCGGCG AACCCGGTCG GATGGCGCTG GCCCCGCCCA GGGGGGTGGA GACGGTGCTC
GACGCGCTGC TCGACAACGC GCTGAAGTTC ACCGCCGAGG GCACGCTCGT GCACGTGGTG
GTGCGGCGGG CCGACGGCCG GGTGCGGCTC TCGGTGGTGG ACGAGGGGCC CGGCCTGGAC
GAGGAGGAGA GGGAGCGGGC CACCGACCGG TTCTGGCGCT CGCCCTCGCA CCAGAACGTG
GCGGGCTCGG GGCTGGGGCT GTCGATCGTG CGGCGGATCG TGGAGCGGGT CGGCGGCCGG
GTGCGGCTGT TCCGGGGCGA CGAGGGCGGC CTCGGCGTCG AGGTGGACTT TCCCGCTTCC
GGGTGA
 
Protein sequence
MRSRLLGVVL ALVVLVLVGM GVPLGRGVAA TEQQEMFLDR LTDTARFASL VQRPVIDDQP 
EVVLPELKRY SELYGIDVVL LRRDGQVALS SADREPDLSS PAVQETVRGA LAGRLPSNPD
LVMPWQDHPL VVAEPVLVDG EVRGAVVTFS PTGKTRTGVA LWWLAILAGA LGALALAVLA
ALPLVRWMLR PVLALDDATS GLVGAIVSGR PVPPVGGSSG PPELRQLGRS FDQMAASVGD
VLAAQRAFVA DASHQLRNPL TALKLRLSNL EDAVTEEGRP HQAAALAEAN RLNRILDEML
AMARAESSSV APVEVDVDRA VAGRLTAWMP AATARDVHLV LGGEPGRMAL APPRGVETVL
DALLDNALKF TAEGTLVHVV VRRADGRVRL SVVDEGPGLD EEERERATDR FWRSPSHQNV
AGSGLGLSIV RRIVERVGGR VRLFRGDEGG LGVEVDFPAS G