Gene Amir_1412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1412 
Symbol 
ID8325592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp1557966 
End bp1558961 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content70% 
IMG OID644941960 
Product1-aminocyclopropane-1-carboxylate deaminase 
Protein accessionYP_003099210 
Protein GI256375550 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2515] 1-aminocyclopropane-1-carboxylate deaminase 
TIGRFAM ID[TIGR01274] 1-aminocyclopropane-1-carboxylate deaminase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.322961 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCACTGG ACGACTTCAG CCGCTTCCCG CTGACCTTCG GCCCGTCGCC GGTCCACCCG 
CTGGAGCGCC TGACCGCGCA CCTGGGCGGC GCGCGGGTGT GGGCCAAGCG CGAGGACTGC 
AACTCCGGCC TCGCCTACGG CGGCAACAAG ACCAGGAAGC TGGAGTACCT GGTCGCCGAC 
GCCTTGGCGC AGGGCTGCGA CACCCTGGTC TCGATCGGTG GCGTGCAGTC CAACCACACC 
CGCCAGGTGG CCGCAGCCGC CGCGCGCGCC GGGCTGCAGT GCGTGCTGGT GCAGGAGAGC 
TGGGTCGACT GGCCGGACGC GGTGTACGAC CGGGTCGGCA ACATCCTGCT CAGCAGGCTC 
ATGGGCGCCG ACGTCCGCCT GGTCGAGGCG GGCTTCGGGA TCGGCGTGAA GCCGGCGTGG 
GAGCAGGCAG TTGACGACGT GCGCGCACGC GGCGGCAAGC CCTACCCCAT CCCCGCAGGC 
GCCTCGGACC ACCCACTGGG CGGGCTCGGG TTCGCAGGCT GGGCGGCCGA GGTAGATCGT 
CAGGAGAAGG AGTTGGGCGT CCACTTCGAC ACGATCGTCG TCTGCTCCGT CACCGGCAGC 
ACCCAGGCGG GCATGGTCGC GGGCTGGGCG GGCACCGGCA GGCGGATCAT CGGCATCGAC 
GGCTCAGCCA AGCCCGAGGA GACCAAGGAC CAGGTCACCA GGATCGCGAA GAACACCGCG 
TCCCTGCTGG GCGTCGAGGT GACGGACGAC GAGGTCATCC TCGACGACCG CTTTCACGAG 
GGCATCTACG GCGTGCCGGG CGAGTCCACC ACCGAGGCCA TGAAGCTGGG CGCACGCCTG 
GAAGGCATGA TCACCGACCC GGTGTACGAG GGCAAGTCCC TGGCAGGCCT GATCGAACTG 
GTCACCACCG CTGAAATCCC CAAGGACTCC ACCGTCCTCT ACGCCCACCT AGGCGGCCAG 
CCAGCCCTGA ACGCCTACAG CTCCCTCTTC CGCTAA
 
Protein sequence
MALDDFSRFP LTFGPSPVHP LERLTAHLGG ARVWAKREDC NSGLAYGGNK TRKLEYLVAD 
ALAQGCDTLV SIGGVQSNHT RQVAAAAARA GLQCVLVQES WVDWPDAVYD RVGNILLSRL 
MGADVRLVEA GFGIGVKPAW EQAVDDVRAR GGKPYPIPAG ASDHPLGGLG FAGWAAEVDR 
QEKELGVHFD TIVVCSVTGS TQAGMVAGWA GTGRRIIGID GSAKPEETKD QVTRIAKNTA 
SLLGVEVTDD EVILDDRFHE GIYGVPGEST TEAMKLGARL EGMITDPVYE GKSLAGLIEL 
VTTAEIPKDS TVLYAHLGGQ PALNAYSSLF R