Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1379 |
Symbol | |
ID | 8325559 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 1520999 |
End bp | 1522552 |
Gene Length | 1554 bp |
Protein Length | 517 aa |
Translation table | 11 |
GC content | 79% |
IMG OID | 644941927 |
Product | protein of unknown function DUF901 |
Protein accession | YP_003099177 |
Protein GI | 256375517 |
COG category | [R] General function prediction only |
COG ID | [COG3688] Predicted RNA-binding protein containing a PIN domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGGGACC CGATCACGGC AGCGGACGAG GACGACGAGC GGGGCGACGG TGAGCCGGAG CCGCTCGTCG GGTCCGCTGT GGAGTCGGGC GGGGAACCGG GCGTGGAGTT CGGCGCGGAG CCGGGCGCCG GGGCCGCCGA GAGGTCCGAC GCCGGGGAGT CCGAAGCCGG GGAGTCCGAC GGGGAATCCG CCGCCGAGGT CGCCACAGAG GCCGCCGCCG AGACCGCCGC CGCCGAGACC GCCGCCGCCG AGACCGCCGC CGAGTCCGAC GTGGACTGGA CCGCGCTGCC CGACCCGCTG CGCGCCAGGC TCTCCGAGCT GAGCGCCGAC GCGGTGGGCG AGCTGCCCAA GGTGGACGTG CCGCAGTCGC TGCGCGCCGT CGCCAGGTTC GCGCCCGCCA AGCGGGCCAG GCTGGGCGCG CCCGCGCTGA TCGGCGCGCT GCGCTCGTCG GCGGGCTTCC GCGCCGCCGT CGTGGACTGG TTGCGGCGCA ACCGGCCGTC CGCGCTGGAG CACACCGCGC CCGACCCGGT CACCGCCGGG GCCGCCGCGC TGCTGCTGGG CGAGGAGGGC GCGGCGCACC TGGTGGAGCT GGTGGCGCGC CGCGCGGCCG ACGCCGCCCT GCGGGCCGAG CGGGACAGCG CGGTGGCGCG CCTGGAGCGG CTGGAGGCCG AGCTGGAGCG GCTGCGCGCC GACCAGGTCG AGGCCGGTGG GGTGGCGCGC CGGGTGCGCG TGGAGGCGGA CGCCGAGCTG GAGCGGCTGC GCAAGCGGCT GCGGGAGCAG GGCGTCAAGC TCCGCGAGGC CAAGGACCGG GCCGAGGCCG CCGCCCAGGA GGCGCTGCGG GTGCGCTCCG AGGTCGACGT CGAGGTCGGC AAGCTGATCG CCGAGCGGGA CCGGGAGCGC GAGCGCGCCG AGGCCGAGCG GGTCAGGGCG CGGCGCGCGG TCGCCGACGC CGAGGTGGCC CGCCAGTCGG CGCGCGAGGC GCGGCAGGCC GACGAGGTGC GGCTGGCGCT GCTCGTGGAC ACCCTGGACG GCGCGGTCAG CGGGCTGCGC CGGGAGCTCG CGCTGGGCGG CGGCACCGGG CCGCGCCCGG CGGACATGGT GCGCGGGGCG AGCGCGGGGC AGGGCTCGGT CAACCGGGTC GAGGACCCGG CCGCGCTGGA CCGGCTGCTG GCGCTGCCCG CCGTGCACCT GATCGTCGAC GGCTACAACG TCACCAAGAC CGGCTACCCG GAGCTGGCGC TCGCCGACCA GCGGGACCGG CTGGTGCACC AGCTCGCCGT GCTGGCCGCG CGCACCGGGG CCGAGGTGAC CCTGGTGTTC GACGGCGCGG GCGTGGTCGC CGTGCCCGCC GCCGCGCCGC GCGGGGTGCG GGTGCTGTTC AGCGACCCCG GCGTGCTGGC CGACGACGTC ATCCGGGCCC TGGTCACCGC CGAGCCCGAG GGCAGGCCGG TGGTCGTGGT GACCTCCGAC CGGGCCGTCG CCGACTCGGT GCGCAGGCGC GGCGCGCACC CCGTCCCGTC CGCCGTGCTG CTCGCCCGCC TCGGCCGCGT CTGA
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Protein sequence | MRDPITAADE DDERGDGEPE PLVGSAVESG GEPGVEFGAE PGAGAAERSD AGESEAGESD GESAAEVATE AAAETAAAET AAAETAAESD VDWTALPDPL RARLSELSAD AVGELPKVDV PQSLRAVARF APAKRARLGA PALIGALRSS AGFRAAVVDW LRRNRPSALE HTAPDPVTAG AAALLLGEEG AAHLVELVAR RAADAALRAE RDSAVARLER LEAELERLRA DQVEAGGVAR RVRVEADAEL ERLRKRLREQ GVKLREAKDR AEAAAQEALR VRSEVDVEVG KLIAERDRER ERAEAERVRA RRAVADAEVA RQSAREARQA DEVRLALLVD TLDGAVSGLR RELALGGGTG PRPADMVRGA SAGQGSVNRV EDPAALDRLL ALPAVHLIVD GYNVTKTGYP ELALADQRDR LVHQLAVLAA RTGAEVTLVF DGAGVVAVPA AAPRGVRVLF SDPGVLADDV IRALVTAEPE GRPVVVVTSD RAVADSVRRR GAHPVPSAVL LARLGRV
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